Pairwise Alignments

Query, 578 a.a., alkaline protease secretion transporter ATP-binding protein from Pseudomonas putida KT2440

Subject, 582 a.a., lipid A export ATP-binding/permease MsbA from Vibrio cholerae E7946 ATCC 55056

 Score =  149 bits (376), Expect = 3e-40
 Identities = 142/545 (26%), Positives = 248/545 (45%), Gaps = 32/545 (5%)

Query: 31  VINVMMLTPAIYMLQ-VYDRALVSRNVTTLGMLTLLVVGLFLLMSALEMVRTRVLIRVGN 89
           VIN    T  I +L+ + D    +     L +L  +++GL  +        +  L  V  
Sbjct: 35  VINAAADTYMISLLKPLLDEGFGNAESNFLRILPFMILGLMFVRGLSGFASSYCLSWVSG 94

Query: 90  GLDMSLNRRIFSAAFERNL-----SRAGGNPAQALQDLAQVRQFLTGNGLFAFFDAPWTP 144
            + M + RR+F+      +        GG  ++   D  QV    T   L +      + 
Sbjct: 95  NVVMQMRRRLFNHFMHMPVRFFDQESTGGLLSRITYDSEQVAG-ATSRALVSIVREGASI 153

Query: 145 IYLLVCYLIHPW-LGLVTTIGSLILVGLAYLTEKATQKPLAEANQAAMSSASYANNNLRN 203
           I LL     + W L LV  + + ++        K  +K       A     S A   L+ 
Sbjct: 154 IGLLTLMFWNSWQLSLVLIVVAPVVAFAISFVSKRFRKISRNMQTAMGHVTSSAEQMLKG 213

Query: 204 AEVIEAMG-------MLPSIGKRWYQGHLRILQMQTLASDRAALISSIGRFVRITLQSLI 256
            +V+ + G           +     Q  ++++  Q++A     +I+S+  F  + L S+ 
Sbjct: 214 HKVVLSYGGQEVERKRFDKVSNSMRQQTMKLVSAQSIADPVIQMIASLALFAVLFLASVD 273

Query: 257 LGTGALLAIEGTITPGMM-IACSILTG--RALGPVEQVIAAWKQ-LLGCRLAWGRLNDLL 312
                  +I   +TPG   +  S + G  R L  +  V + +++ +  C+  +G L DL 
Sbjct: 274 -------SIRAELTPGTFTVVFSAMFGLMRPLKALTSVTSEFQRGMAACQTLFG-LMDL- 324

Query: 313 QDYPQRPPSMSLQRPMGMLAVENVIAGAPGSSTSIVRGVSFSLAPGDSLGVIGPSASGKS 372
            +  +       +R  G + V++V     G     +  VSFS+  G ++ ++G S SGKS
Sbjct: 325 -ETERDNGKYEAERVNGEVDVKDVTFTYQGKEKPALSHVSFSIPQGKTVALVGRSGSGKS 383

Query: 373 TLARLLVGVWPAQAGKVRLDGADIFTWNKAELGPWLGYLPQDVELFEGTIAENIARFAEV 432
           T+A L    +   +G + LDG D+  +    L      + Q+V LF  TIA NIA  AE 
Sbjct: 384 TIANLFTRFYDVDSGSICLDGHDVRDYKLTNLRRHFALVSQNVHLFNDTIANNIAYAAEG 443

Query: 433 D--SDAVIRAARSSGVHDMILRFPQGYDTRLAADGSPLSGGQKQRIALARALYGEPNLVV 490
           +   + + +AAR +   + I   PQG DT +  +G+ LSGGQ+QR+A+ARAL  +  +++
Sbjct: 444 EYTREQIEQAARQAHAMEFIENMPQGLDTVIGENGTSLSGGQRQRVAIARALLRDAPVLI 503

Query: 491 LDEPNANLDDVGEKALVDALAELKARGATVVLISHRPNVLCAVDQILMLRDGGVHMLGSR 550
           LDE  + LD   E+A+  AL EL+ +  TV++I+HR + +   D+IL++ +G +   G  
Sbjct: 504 LDEATSALDTESERAIQAALDELQ-KNKTVLVIAHRLSTIEQADEILVVDEGEIIERGRH 562

Query: 551 DEVFA 555
            ++ A
Sbjct: 563 ADLLA 567