Pairwise Alignments

Query, 578 a.a., alkaline protease secretion transporter ATP-binding protein from Pseudomonas putida KT2440

Subject, 1000 a.a., cyclic nucleotide-binding domain (cNMP-BD) protein from Synechococcus elongatus PCC 7942

 Score =  206 bits (524), Expect = 4e-57
 Identities = 148/533 (27%), Positives = 251/533 (47%), Gaps = 12/533 (2%)

Query: 31  VINVMMLTPAIYMLQVYDRALVSRNVTTLGMLTLLVVGLFLLMSALEMVRTRVLIRVGNG 90
           V+ +  L   + + QV D+ +   ++  L    +L+V L +    L  +RT +     N 
Sbjct: 452 VVQLFTLANPLIIQQVIDKVIGQGSLNNLNSFAVLLVILGVFQGLLSSLRTYLFADTTNR 511

Query: 91  LDMSLNRRIFSAAFERNLS----RAGGNPAQALQDLAQVRQFLTGNGLFAFFDAPWTPIY 146
           +D+ L   I     +  L     R  G  +  +Q+L ++R FLTG  L    DA ++ IY
Sbjct: 512 IDLKLGSDIIDRLLKLPLRYFERRPVGELSSRVQELEKIRSFLTGTALTTVMDAMFSVIY 571

Query: 147 LLVCYLIHPWLGLVTTIGSLILVGLAYLTEKATQKPLAEANQAAMSSASYANNNLRNAEV 206
           +LV  +   +L LV      I V + +      ++ L E  +    + S     L   + 
Sbjct: 572 ILVMLVYSWFLTLVALSTVPIFVAITFFASPVVRRQLREKAERNAETQSQLVEVLSGIQT 631

Query: 207 IEAMGMLPSIGKRWYQGHLRILQMQTLASDRAALISSIGRFVRITLQSLILGTGALLAIE 266
           ++A  +      +W + + R +       + +   SS+  F       L+L  G  L  +
Sbjct: 632 VKAQNIELKARWQWQERYARYIAAGFRNINTSTAASSLTNFFNQLSGLLVLWVGVYLVFD 691

Query: 267 GTITPGMMIACSILTGRALGPVEQVIAAWKQLLGCRLAWGRLNDLLQDYPQRPPSMS--- 323
             ++ G +IA  I++G    P+ ++   W+      L+  RL D++ D PQ         
Sbjct: 692 NQLSLGQLIAFRIISGYVTQPLLRLAQLWQNFQETALSLERLADIV-DTPQESDDDDQGK 750

Query: 324 LQRPM--GMLAVENVIAGAPGSSTSIVRGVSFSLAPGDSLGVIGPSASGKSTLARLLVGV 381
           +  PM  G +   N+           +  V+  +  G+ +G++G S SGKSTL +LL  +
Sbjct: 751 IPMPMINGKVEFRNLSFRFGEQGPLQLSNVTLEIPAGEYVGIVGQSGSGKSTLMKLLPRL 810

Query: 382 WPAQAGKVRLDGADIFTWNKAELGPWLGYLPQDVELFEGTIAENIARFA-EVDSDAVIRA 440
           +    G++ +DG DI       L   +G +PQD  LF+GT+ ENI+       +D +I A
Sbjct: 811 YSPLEGEILIDGYDISKVELYSLRRQIGIVPQDSLLFQGTVEENISLTKPNATTDEIITA 870

Query: 441 ARSSGVHDMILRFPQGYDTRLAADGSPLSGGQKQRIALARALYGEPNLVVLDEPNANLDD 500
           A+++G HD I+  P GY+TR+   G  LSGGQ+QRIA+AR +   P L++LDE  + LD 
Sbjct: 871 AKAAGAHDFIMTLPLGYNTRVGERGGALSGGQRQRIAIARTVLQNPQLLILDEATSALDY 930

Query: 501 VGEKALVDALAELKARGATVVLISHRPNVLCAVDQILMLRDGGVHMLGSRDEV 553
             E+  V    +   RG TV  I+HR + +   D+I+++  G +   GS DE+
Sbjct: 931 DTERQ-VSINLQQHFRGKTVFFITHRLSTVRHADRIIVMDKGAMVEQGSHDEL 982