Pairwise Alignments

Query, 299 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 291 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  181 bits (460), Expect = 1e-50
 Identities = 102/287 (35%), Positives = 165/287 (57%), Gaps = 6/287 (2%)

Query: 13  FAKVAQAGSLSAAARALGLTPSAVSRILARTEQRLGTRLLLRTTRALTLTPEGEAYLRGA 72
           F  VA+A + + AA+ L ++ + VSR +   E RLGT+L  RTTR ++LT EG  Y R  
Sbjct: 10  FVAVAEAENFTLAAQRLNVSTAHVSRQIGALENRLGTKLFYRTTRKVSLTEEGTIYYRHC 69

Query: 73  RRVLADMLEVEEAITD-QGVPRGRLRVSAALGHARLTVVPLLAAFSARYPQVLVDLTLSD 131
           R++   + E E AITD +  P+G ++++A + +    ++PLL  F  +YP V  ++ L++
Sbjct: 70  RQLQTGLEEAERAITDLKDSPQGLVKLTAPVAYGEKFIMPLLNDFMVQYPSVECNVDLTN 129

Query: 132 EVADILGGQADVALRFGHLPDSSLSARAIGETGQVVVASPEYLQRYGTPLEPEDLARHNC 191
              D++ G  D+A+R G L DSSL A+ +      V ASP Y+++YG P    +L +HNC
Sbjct: 130 RTLDLIEGGYDLAIRLGKLADSSLMAKPLSSRTHYVAASPSYVEKYGEPHTLSELNQHNC 189

Query: 192 LRFNFRRAMPDWPFHRDGHTFSLKVKGNIECSSGEALAQLARLGAGVARIGTFTVADDLA 251
           L  N       W F   G   + KV+G + C+SG AL   A  G G+ ++  + + +D+ 
Sbjct: 190 LIGNHNY----WRFIEHGRERNFKVRGKLICNSGYALRDAALKGIGIVQLPDYYIEEDIH 245

Query: 252 NGQLVPLLEAYNPGDREPIHAVFVGGPAMPARVRVFVDFLVEQLSGG 298
            G+L+  L+ +    +E I A++     + A+VRV VD+L E+L+GG
Sbjct: 246 AGRLISFLDTHREA-KEGIWALYPQNRHLSAKVRVLVDYLAEKLTGG 291