Pairwise Alignments

Query, 410 a.a., porin-like protein from Pseudomonas putida KT2440

Subject, 439 a.a., outer membrane porin, OprD family. from Pseudomonas stutzeri RCH2

 Score =  220 bits (561), Expect = 6e-62
 Identities = 145/441 (32%), Positives = 210/441 (47%), Gaps = 33/441 (7%)

Query: 1   MKCRTLYPLVPTFALAASLPLQA---LAEGFVDDAKASLTLRNFYMNRDYT---GTASQG 54
           M  + ++ L        S P+ A    AEGF++ +  SL  RNFY NRD+      A  G
Sbjct: 1   MSKKAVFSLTALSLALGSAPVFAQSETAEGFIEGSTLSLINRNFYFNRDFRDGESAAGNG 60

Query: 55  KAEEWTQSFIFDFKSGYTPGVVGFGVDVLGLYSIKLDGGKGTAGT----QLLPVHDDGRP 110
            +EEW    +  F+SGYT G VG G D   +  +KLD G G +G      LLP    G P
Sbjct: 61  YSEEWAHGLMAFFESGYTQGSVGIGFDAFAMLGLKLDSGSGRSGVGGSIDLLPHDSAGDP 120

Query: 111 ADDFGRTALAGKMRVSRTELKVGEWSPTLPILRADDGRSLPQTLQGAQVTSNELAGLSLY 170
            DDF R   A K R+  TE+K G+  PT P++   D R LP++ +G  V +N L  L+L 
Sbjct: 121 EDDFTRVGGAVKARLLDTEIKAGDVFPTTPVVHFGDSRLLPESFKGVTVVNNSLDDLTLQ 180

Query: 171 GGQFRQNSPRNDASM-QDMSLFTRTAFTSDRFNFAGGEYRFNQERTLVGAWYAQLEDIYQ 229
           GG+    S  N ++M +D   F      +    +AGG+Y  N+  +L   + ++L+D + 
Sbjct: 181 GGRLHAMSQPNTSNMNEDFVTFYGGGVDAPWLGYAGGDYSVNENISL-SLYTSRLKDAWN 239

Query: 230 QRYFQVQHQQPLGNWV-LGANLGYFWGKDDGGAKAGELNNRTASGLFSAKLGGNTFYVGL 288
           Q YF      PL + V L A+  Y+   D+G    GE NN   S       G +T     
Sbjct: 240 QHYFGASATYPLSDIVALLASFNYYKATDEGRELLGEFNNNIWSSSLGVAFGAHTVTASY 299

Query: 289 QKVMGDDEWFRVNGASGGTLANDAFGSSYESARERSWQVRHDFNFVVLGIPGLTLMNRYI 348
           Q+  G++++  +  A    L N    S + S +E+SW +R+D N    GIPGLT M RY 
Sbjct: 300 QRNNGNNDFDYLRQADSIYLNNSIQYSDFNSPKEQSWMLRYDLNMAEYGIPGLTFMTRYA 359

Query: 349 HGYNVHNASTQ-------------------GRESELAYVVQSGPFKALNLKWRNSSQRRD 389
            G+    ++                      R+ E  YVVQ+G  K L+L+ R ++ R  
Sbjct: 360 RGWGADYSNANEVYMRQDDNGAPLTGQNRWERDVEARYVVQTGSLKDLSLRVRQATTRAT 419

Query: 390 WGSTNSFDENRLIVSYPLSLL 410
               +  DE R I  YPLS+L
Sbjct: 420 -AFESDLDEVRFIAEYPLSIL 439