Pairwise Alignments

Query, 308 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 298 a.a., Transcriptional regulator, LysR family, in formaldehyde detoxification operon from Pseudomonas fluorescens FW300-N2E2

 Score =  179 bits (454), Expect = 7e-50
 Identities = 106/287 (36%), Positives = 152/287 (52%), Gaps = 7/287 (2%)

Query: 13  IELFCLAAELGSFTAAALAAGVTPAAVSRSISRLEERLGSRLFVRTTRSIRLTEGGRGYY 72
           I+ F   AE   FTAAA   GV+ + +SR I RLEERL +RL  R+TR + LTE G+ + 
Sbjct: 9   IDEFVAVAECSQFTAAAERLGVSSSHISRQIVRLEERLQTRLLYRSTRRVTLTEAGQTFL 68

Query: 73  EQCRQALTQLVEAERVVTGQQQEPSGTLRISLPTTYGHHRILPLLPEFRRRYPKVQVDIH 132
           + C++      EA R V     EP G LR++    YG   I+PL+  F   YP+++VDI 
Sbjct: 69  QHCQRLQDGREEALRAVGDLASEPKGMLRMTCAVAYGERFIVPLVTRFMGLYPQLRVDIE 128

Query: 133 LGNRNIDFVGEGYDLAIRVRAQPDSTLIARPLEDARLVVVATPDYLEHAGAPQSLEELAQ 192
           L NR +D V E  DLAIR+    DS L+A  L   R+ + A+P YLE  G P SL EL++
Sbjct: 129 LSNRPLDLVHESLDLAIRLGRLQDSRLVATRLAPRRMYLCASPSYLERYGRPHSLSELSR 188

Query: 193 HDCIQFELPSSGRRIAWLFDEEGREREVLTEGGYVCSDDVLGGVTLAKHGAGLFQTYRFI 252
           H+C+       G    W  ++ GRE     +G + C+      +  A  G GL Q   + 
Sbjct: 189 HNCL------IGSSDIWQLEQNGREFSQRVQGNWRCNSG-QAVLDAALQGVGLCQLPDYY 241

Query: 253 VERELAEGSLVEVLRPFAGRSRPFTLLYPQGRHMPLRLRAFVDFIMD 299
           V   L  G+L+ +L      +     LYPQ RH+  ++R  VD++ +
Sbjct: 242 VLEHLHSGALISLLEAHQPPNTAVWALYPQQRHLSPKVRKLVDYLKE 288