Pairwise Alignments

Query, 469 a.a., putative phage integrase from Pseudomonas putida KT2440

Subject, 403 a.a., Integrase from Pseudomonas stutzeri RCH2

 Score = 86.3 bits (212), Expect = 2e-21
 Identities = 100/409 (24%), Positives = 160/409 (39%), Gaps = 66/409 (16%)

Query: 44  YEFKLDGARTRKRLGSWPKKSLAQIRSERDEARVLVTKGLHPTLAAKAARIEAQAAIATT 103
           ++++L G      +GS+P+ SLA+ R+ R++AR LV +G+HP      A    Q      
Sbjct: 43  WKYRLQGKENLFAIGSFPQVSLAEARTAREKARALVKQGIHP------AHERQQVKQRNL 96

Query: 104 IAEAEREAAENKTVSDLFDEWIRD--GVSRQDGNAELIRSFKKDVLPLIGKKPLRNLTEK 161
            A AER+ A+  + + +   ++ +   V             +K + P     P+ ++  K
Sbjct: 97  EALAERKRAQESSFAKVAQAYLAEIKPVFAHSSYRTKESRIRKYLSPKFDGMPMSDIGVK 156

Query: 162 DLLAVLRSVKSRGLNRTVVIRSKDIGQMLRWAEKRKPWRGLMTDGNPADLIDVNKLLDHD 221
            +  +L   K+ G    + ++  D+  +  +A  R      + + NP   +         
Sbjct: 157 QIRPLLEECKAHGAWAAIHVKG-DLSAIFEFAVVRG-----LVEANPIPSL--------- 201

Query: 222 YEEQRDRLLSPDEIRELRDVLERLENDYDELPAGQKYSGIRPVNTRVQCALWICLSTLCR 281
               R  L  P    +     E+++  Y      Q   G R       C   I L T CR
Sbjct: 202 ----RGLLRVPASESKAAMTREQIQKFY------QALRGYRGYPETALCLRLIAL-TACR 250

Query: 282 IGELLKAEWRYVDLEKGTWFIPAEATKGHKGKRQDHHVFLSAFSIAQFKRLQEETGDTPF 341
            GE   AEW   D E   W  PA   K     R++H   LSA +IA  K LQ  TG   +
Sbjct: 251 PGEAADAEWEEFDFEDAVWRRPAAKMKA----RREHVSPLSAQAIAVLKDLQRITGGGRY 306

Query: 342 CFPSKDGRSHVDTKTVSKLIGDRQCRFKNRSKPLAGRHHDDSLVLSKGTKGEWTPHDLRR 401
            FP + G+       ++  + D                    + L +GT    TPH  R 
Sbjct: 307 LFPHRSGKGFTTPNRLTYAMRD--------------------MNLGRGT----TPHCWRT 342

Query: 402 TGATMMQELGVTLEIIDRCQNHLLGGSKVRRHY---LHHDYAKEKTEAW 447
           T +T   E G   + I+R   H +  +KVR  Y   L  D  +   +AW
Sbjct: 343 TFSTWANENGFRPDAIERQLAH-VESNKVRATYNKALLLDQRRSLLQAW 390