Pairwise Alignments

Query, 340 a.a., DNA-binding transcriptional repressor from Pseudomonas putida KT2440

Subject, 344 a.a., LacI family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  179 bits (454), Expect = 9e-50
 Identities = 114/331 (34%), Positives = 185/331 (55%), Gaps = 3/331 (0%)

Query: 1   MATIKDVAALAGISYTTVSHVLNKTRPVSEQVRLKVEAAIIELDYVPSAVARSLKARSTA 60
           MATI DV  LAG+S  TVS VLN+T  V  Q R  V AA+ +L Y P+++A++L   +T 
Sbjct: 10  MATINDVCKLAGVSKATVSRVLNETGQVKAQTREAVLAAMQQLGYQPNSLAQALATNTTN 69

Query: 61  TIGLLVPNSVNPYFAELARGIEDACERNGYCVILCNSDDNPQKQRSYLRVLLEKRIDGLV 120
           +IGL++P+  + YF  +    E   ++ G  +++ NS ++ Q ++  +  L  +R D ++
Sbjct: 70  SIGLVLPHFESSYFGSILFEAEQGAQKAGKKLLVMNSKNSEQGEKEAVATLAAQRCDAIL 129

Query: 121 VASVGQDD-DLLQSLASVRTPMVIVDRELEGVDADLVRIDHEQGAYLATRHLLELGHRDV 179
           + S   ++  LL+      +P+VI++R L         +D  Q A LA +HLL LGHR +
Sbjct: 130 LYSRHLNEVQLLELQQQHPSPLVILNRRLHHPQLHSFGLDQTQIAQLAMQHLLNLGHRQI 189

Query: 180 AYIGGPAETGVTQLRLSGFRRAMAEAGAPVPGSRVLHCDFTSPGGHAAAAQVL-EGKRPS 238
           A I  P  +   ++R   +++A+ E G  +  S V+  D T  GG+ A  Q+L +G   +
Sbjct: 190 ACITSPLVSETGKIRYQVYQQALHEQGIELSSSLVIEGDNTLLGGYQAMQQLLQQGISMT 249

Query: 239 AIFAGNDMIGFGVLRAAAERNISVPGELSVIGFDDIELSRYVYPSLTTVGQSIRELGESA 298
           A+FA ND +  G +RA  E  I VP ++S+IG D+   + +  PSL++V   I EL + A
Sbjct: 250 AVFACNDDMALGAMRAMHEHGIHVPKQVSIIGIDNEPAAAFAIPSLSSVSLPIGELTQQA 309

Query: 299 ASLLLTRIATPRQGAAEQRIVAPRIVLREST 329
            SL +  IA  +   A+ R+    ++ REST
Sbjct: 310 ISLAV-EIANKKPQDAQHRLYQGSLIAREST 339