Pairwise Alignments

Query, 340 a.a., DNA-binding transcriptional repressor from Pseudomonas putida KT2440

Subject, 347 a.a., transcriptional regulator from Sinorhizobium meliloti 1021

 Score =  186 bits (472), Expect = 8e-52
 Identities = 116/331 (35%), Positives = 182/331 (54%), Gaps = 5/331 (1%)

Query: 3   TIKDVAALAGISYTTVSHVLNKTRPVSEQVRLKVEAAIIELDYVPSAVARSLKARSTATI 62
           T+ D+A  AG+S +TVS VL  +  V+E  R KV A I EL YV +  A +L+   +  I
Sbjct: 7   TVVDIARAAGVSKSTVSLVLQASPLVNESTRAKVNAVIRELGYVYNRSAANLRQARSKII 66

Query: 63  GLLVPNSVNPYFAELARGIEDACERNGYCVILCNSDDNPQKQRSYLRVLLEKRIDGLVVA 122
           G++V +  N +FAELA G+++  +  G+   L N+ +   +QR  +  + E  + GL+++
Sbjct: 67  GIVVNDLTNSFFAELAVGVDEVVQTAGFVQFLANTSEKLDRQREVIASMREHGVSGLIIS 126

Query: 123 SV-GQDDDLLQSLASVRTPMVIVDRELEGVDADLVRIDHEQGAYLATRHLLELGHRDVAY 181
              G +   L  L +   P+V+V R++ G     +  D+  GA  A RHL+E GHR VA+
Sbjct: 127 PARGTEAADLAPLVAAGIPVVLVVRDIPGAGVSSLTSDNHAGAVAAVRHLVERGHRRVAF 186

Query: 182 IGGPAETGVTQLRLSGFRRAMAEAGAPVPGSRVLHCDFTSPGGHAAAAQVLEGK-RPSAI 240
           +GG A+T V + R+ G+  A+ EAG  V    ++    +  GG  A  Q +  K RP+A 
Sbjct: 187 LGGFADTAVFEARMRGYGDALREAGLEVSDDLIIGSAPSRAGGVTAIEQAMMLKERPTAA 246

Query: 241 FAGNDMIGFGVLRAAAERNISVPGELSVIGFDDIELSRYVYPSLTTVGQSIRELGESAAS 300
              ND + FGV      R +    + +VIGFDD+  ++   P+LTTV    + +GE AA 
Sbjct: 247 LCFNDAVAFGVCDGLRARRLEPGEDFAVIGFDDVIEAKTAVPALTTVSVDPQGMGERAAE 306

Query: 301 LLLTRIATPRQGAAEQRIVAP-RIVLRESTG 330
           LLL +I + R     + IV+P R+ +R+S G
Sbjct: 307 LLLKQINSGR--VEPEAIVSPVRLAIRQSCG 335