Pairwise Alignments

Query, 340 a.a., DNA-binding transcriptional repressor from Pseudomonas putida KT2440

Subject, 333 a.a., transcriptional regulator from Sinorhizobium meliloti 1021

 Score =  182 bits (463), Expect = 8e-51
 Identities = 110/335 (32%), Positives = 180/335 (53%), Gaps = 18/335 (5%)

Query: 4   IKDVAALAGISYTTVSHVLNKTRPVSEQVRLKVEAAIIELDYVPSAVARSLKARSTATIG 63
           IKD+A  AG+S  TVS  L  +  V+ + R +V     ELDY P+  AR+L+ R + T+ 
Sbjct: 7   IKDIAEKAGVSVATVSRALAASTLVTAETRQRVLDLARELDYRPNVSARNLRTRRSMTVL 66

Query: 64  LLVPNSVNPYFAELARGIEDACERNGYCVILCNSDDNPQKQRSYLRVLLEKRIDGLV--- 120
           ++V +  NP++ ++ +G+E      GY V++ N++++P ++  Y  +L +   DG++   
Sbjct: 67  MVVRDVGNPFYLDILKGVEATAREAGYAVLMGNTENDPARETEYFSMLRDGHADGMILMT 126

Query: 121 --VASVGQDDDLLQSLASVRTPMVIVDRELEGVDADLVRIDHEQGAYLATRHLLELGHRD 178
             + S G  + L         P+V+    +EG     V++D+   A  A +HL+ LGHR 
Sbjct: 127 GKLPSAGDWNHL---------PVVVALEMIEGSGLPHVQVDNVAAARGAVQHLISLGHRR 177

Query: 179 VAYIGGPAETGVTQLRLSGFRRAMAEAGAPVPGSRVLHCDFTSPGGHAAAAQVLE-GKRP 237
           +A+I GP    ++  R  GFR AM +AG  +P    +  DF    G      +      P
Sbjct: 178 IAHISGPVPEPMSVYRREGFRLAMRDAGLTIPAGYEVRGDFLIESGEECCRSLFSLSDPP 237

Query: 238 SAIFAGNDMIGFGVLRAAAERNISVPGELSVIGFDDIELSRYVYPSLTTVGQSIRELGES 297
           +A+F  ND + +G +         VPG++SV+GFDD+ LS+  YP LTTVGQ   E+G +
Sbjct: 238 TALFVANDEMAYGAVHELRRIGRDVPGDVSVVGFDDLYLSKAFYPPLTTVGQPRSEIGRT 297

Query: 298 AASLLLTRIATPRQGAAEQRIVAPRIV-LRESTGP 331
           A ++LL  +A   + A  + IV P ++ +R ST P
Sbjct: 298 AMAVLLGILAGGSEVA--EPIVLPTVLKVRGSTAP 330