Pairwise Alignments

Query, 340 a.a., DNA-binding transcriptional repressor from Pseudomonas putida KT2440

Subject, 342 a.a., DNA-binding transcriptional regulator CytR from Klebsiella michiganensis M5al

 Score =  175 bits (444), Expect = 1e-48
 Identities = 106/329 (32%), Positives = 179/329 (54%), Gaps = 2/329 (0%)

Query: 2   ATIKDVAALAGISYTTVSHVLNKTRPVSEQVRLKVEAAIIELDYVPSAVARSLKARSTAT 61
           AT+KDVA  A +S  TVS  L     VS+  R +VE A +E+ Y+P ++ R++K   + T
Sbjct: 10  ATMKDVAQKANVSTATVSRALMNPDKVSQSTRNRVEQAALEVGYLPQSLGRNMKRNESRT 69

Query: 62  IGLLVPNSVNPYFAELARGIEDACERNGYCVILCNSDDNPQKQRSYLRVLLEKRIDGLVV 121
           I ++VP+  +P+F+E+ RGIE       Y V++ +     +++++++ +++ K+IDG+++
Sbjct: 70  ILVIVPDICDPFFSEIIRGIEVTAAEQEYLVLIGDCAHQNRQEKTFIDLIITKQIDGMLL 129

Query: 122 ASVGQDDDLLQSLASVRTPMVIVDRELEGVDADLVRIDHEQGAYLATRHLLELGHRDVAY 181
                  D          PMV+ +     ++   V ID+   A+ A  +L ELGHR +  
Sbjct: 130 LGSRLPFDAGVEEQRNLPPMVMANEFAPELELPTVHIDNLTAAFNAVNYLHELGHRRIGC 189

Query: 182 IGGPAETGVTQLRLSGFRRAMAEAGAPVPGSRVLHCDFTSPGGHAAAAQVLE-GKRPSAI 240
           I GP E  +   RL G+ +A+  +G  V    +   +FT   G +A  Q+L     P+AI
Sbjct: 190 IAGPEEMPLCHYRLQGYVQALRRSGITVDPHYIARGNFTYEAGASALEQLLALPVPPTAI 249

Query: 241 FAGNDMIGFGVLRAAAERNISVPGELSVIGFDDIELSRYVYPSLTTVGQSIRELGESAAS 300
           F  +D++  G L  A  R + VP +LS+IGFD+I LS +  P LTTV Q   ++G  A  
Sbjct: 250 FCHSDIMALGALSLAKRRGLKVPEDLSIIGFDNISLSEFCDPPLTTVAQPRFDIGREAML 309

Query: 301 LLLTRIATPRQGAAEQRIVAPRIVLREST 329
           LLL ++      ++  R++   +++R ST
Sbjct: 310 LLLDQL-HGHNVSSGSRLLDCELIVRGST 337