Pairwise Alignments

Query, 331 a.a., D-ribose ABC transporter - permease subunit from Pseudomonas putida KT2440

Subject, 333 a.a., ribose ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score =  187 bits (474), Expect = 4e-52
 Identities = 110/294 (37%), Positives = 164/294 (55%), Gaps = 6/294 (2%)

Query: 32  ALLAMIVLFSFLSSHFWSYGTFSTLANQIPDLMVLAVGMTFVLIIGGIDLSVGSVLALAA 91
           ALL ++V+ SFL+ +F++      +  Q     ++AVGMT V++  GIDLSVGSVLAL  
Sbjct: 37  ALLFLVVVVSFLNPNFFTVDNLLNILRQTSVNAIIAVGMTLVILTAGIDLSVGSVLALCG 96

Query: 92  STVSVAILGWGWGVLPSALLGMAVAALAGSITGGVTVAWRIPSFIVSLGVLEMARGLAYQ 151
           +  +  ++     VL +    +   A  G+I+G +    ++ +FI +L  + + RG+   
Sbjct: 97  A-FAATLVAMEVPVLVAVPTALLAGAALGAISGIIIAKGKVQAFIATLVTMTLLRGVTMV 155

Query: 152 FTDSRTAYIG-----DAYAWFSNPVAFGVSPAFIIALLVIVLAQLVLTRTVFGRYLIGIG 206
           +TD R    G     D +AWF      G+     + ++V   A  +L  T FGRY+  +G
Sbjct: 156 YTDGRPISTGFTDTADTFAWFGTGYTLGIPVPVWLMVVVFAGAWYLLNHTRFGRYVYAVG 215

Query: 207 TNEEAVRLAGIDPRPYKVLVFALMGLLAGLAALFQISRLEAADPNAGSGLELQVIAAVVI 266
            NE A RL+GI+    K+ V+A+ GLLA LA +   SRL +A P AG G EL  IAAVV+
Sbjct: 216 GNESATRLSGINVDRVKIGVYAICGLLAALAGIIVTSRLSSAQPTAGMGYELDAIAAVVL 275

Query: 267 GGTSLMGGRGSVISTFFGVLIISVLAAGLAQIGASEPTKRIITGAVIVIAVVLD 320
           GGTSLMGG+G ++ T  G LII  L   L  +  S   + I    VI++AV++D
Sbjct: 276 GGTSLMGGKGRIMGTLIGALIIGFLNNALNLLDVSSYYQMIAKAVVILLAVLVD 329