Pairwise Alignments

Query, 331 a.a., D-ribose ABC transporter - permease subunit from Pseudomonas putida KT2440

Subject, 331 a.a., sugar uptake ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  170 bits (431), Expect = 4e-47
 Identities = 111/323 (34%), Positives = 167/323 (51%), Gaps = 9/323 (2%)

Query: 8   NQDAAPVRRSGTYFGLGTYLGLAGALLAMIVLFSFLSSHFWSYGTFSTLANQIPDLMVLA 67
           N++ A +RR+     L  +L      +A I+ FS  S +F ++G +  +   +    VLA
Sbjct: 18  NRNRAAIRRAPESAALLAFL------VAEIIFFSLSSPYFLTWGNWVNVFTALSITGVLA 71

Query: 68  VGMTFVLIIGGIDLSVGSVLALAASTVSVAILGWGWGVLPSALLGMAVAALAGSITGGVT 127
            G T +LI G  DLSVGS +A  A  +++ I   G  VLP+++L M V    G I G + 
Sbjct: 72  AGGTMLLIAGQFDLSVGSGVAFVALVLALTIDSLG--VLPASVLAMLVGVGIGLINGFLV 129

Query: 128 VAWRIPSFIVSLGVLEMARGLAYQFTDSRTAYIGDAYAWFSNPVAFGVSPAFIIALLVIV 187
               + + I +LG L + RGL       R   I + + W        +  + ++ LLV +
Sbjct: 130 TRIGVNALITTLGTLAIFRGLTQSIGGGRNIPIAN-FDWAIWRPFLNIPLSALVFLLVAI 188

Query: 188 LAQLVLTRTVFGRYLIGIGTNEEAVRLAGIDPRPYKVLVFALMGLLAGLAALFQISRLEA 247
           +  +VL R+VFGR +  IG NE A RL GI  +      F L G   GL  L   S+L +
Sbjct: 189 MVGIVLKRSVFGRSIYAIGANENAARLVGIRTKGVVFAGFLLSGAFIGLGGLISASQLGS 248

Query: 248 ADPNAGSGLELQVIAAVVIGGTSLMGGRGSVISTFFGVLIISVLAAGLAQIGASEPTKRI 307
                G GLEL V+ AV++GGTSL GG G+++ T  G+LI+ VL  GL  +  +   ++ 
Sbjct: 249 TSGTTGLGLELAVVTAVILGGTSLKGGTGTMLGTVIGLLIVGVLNNGLTLMNVNSSWQQA 308

Query: 308 ITGAVIVIAVVLDTYRSRRAGRR 330
            TG ++++AV  D  R R  GRR
Sbjct: 309 ATGLLLILAVSFDQLRQRLVGRR 331