Pairwise Alignments

Query, 331 a.a., D-ribose ABC transporter - permease subunit from Pseudomonas putida KT2440

Subject, 331 a.a., sugar uptake ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  185 bits (469), Expect = 2e-51
 Identities = 113/306 (36%), Positives = 169/306 (55%), Gaps = 8/306 (2%)

Query: 20  YFGLGTYLGLAGALLAMIVLFSFLSSHFWSYGTFSTLANQIPDLM-VLAVGMTFVLIIGG 78
           Y  +    G     L ++ + ++ S  F + G    +  Q+     ++AVGM FV++  G
Sbjct: 19  YHSIVQRFGTLAIFLVLVAVATWWSDSFLTRGNLLNVLRQVASTAGIMAVGMLFVILTRG 78

Query: 79  IDLSVGSVLALAASTVSV--AILGWGWGVLPSALLGMAVAALAGSITGGVTVAWRIPSFI 136
           IDLSVGSV+AL +       A+LG+G G   +  L +   A  G +TGG     R+PSF+
Sbjct: 79  IDLSVGSVMALGSVLTGYFCAMLGYGTGA--TIFLVLLCGAACGLVTGGFIAYLRLPSFV 136

Query: 137 VSLGVLEMARGLAYQFTDSRTAYIGDAYAWFSN---PVAFGVSPAFIIALLVIVLAQLVL 193
           +SL ++ +ARGL+   ++ R   + DA A FS+       G+    I+   + +   +VL
Sbjct: 137 MSLAMMAVARGLSLIISEGRPIPLSDAGAAFSSFGSGFVLGIPQPVILMFAIYIAGGVVL 196

Query: 194 TRTVFGRYLIGIGTNEEAVRLAGIDPRPYKVLVFALMGLLAGLAALFQISRLEAADPNAG 253
             T FGR +  IG+NEEAVRL+GI    Y V V+ + GLLAGLA +   SR        G
Sbjct: 197 NFTRFGRVITAIGSNEEAVRLSGIAVPRYIVAVYVISGLLAGLAGIIAASRTGVGSAQVG 256

Query: 254 SGLELQVIAAVVIGGTSLMGGRGSVISTFFGVLIISVLAAGLAQIGASEPTKRIITGAVI 313
            G EL VIAAVVIGG SLMGG+G VI+T  G L++ ++   +   G     +++  GA+I
Sbjct: 257 IGAELNVIAAVVIGGASLMGGKGGVINTLLGALVMGIITNIMNLAGVPGYHQQVYMGAII 316

Query: 314 VIAVVL 319
           V+A++L
Sbjct: 317 VVAMLL 322