Pairwise Alignments

Query, 331 a.a., D-ribose ABC transporter - permease subunit from Pseudomonas putida KT2440

Subject, 330 a.a., sugar ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  152 bits (383), Expect = 1e-41
 Identities = 101/316 (31%), Positives = 159/316 (50%), Gaps = 6/316 (1%)

Query: 16  RSGTYFGLGTY--LGLAGALLAMIVLFSFLSSHFWSYGTFSTLANQIPDLMVLAVGMTFV 73
           R  T+  +GT    GL   +L++ V+ SF S HF + G F  +        ++ VGMT +
Sbjct: 13  RRPTWKRIGTMREAGLIAIILSLSVIMSFASPHFLTLGNFRAMLMSFSVEGIVVVGMTIL 72

Query: 74  LIIGGIDLSVGSVLALAASTVSVAILGWGWGVLPSALLGMAVAALAGSITGGVTVAWRIP 133
           LI+GGIDLSVGSV+  +   +S ++   G     ++L+G+A +A  G I G       + 
Sbjct: 73  LIVGGIDLSVGSVVCFSM-VLSGSLFLMGVDPWTASLVGIAASAAIGCIMGFFVTVVGLN 131

Query: 134 SFIVSLGVLEMARGLAYQFTDSRTAYI---GDAYAWFSNPVAFGVSPAFIIALLVIVLAQ 190
            FI SL  + + RGL    T      +     A+        FGV    +I + V+    
Sbjct: 132 HFITSLAAMVIVRGLCLVITKGTPLSLFTLPPAFKAVGQGTFFGVPYVILIFIAVVGAFD 191

Query: 191 LVLTRTVFGRYLIGIGTNEEAVRLAGIDPRPYKVLVFALMGLLAGLAALFQISRLEAADP 250
            +L R    R +   G+NE+A   +GI  +  K  V  L   L+G+A    +SR  AA P
Sbjct: 192 FLLRRATAFRKVFYTGSNEKAALYSGIKTKDVKFWVTVLCATLSGVAGTIYMSRFGAATP 251

Query: 251 NAGSGLELQVIAAVVIGGTSLMGGRGSVISTFFGVLIISVLAAGLAQIGASEPTKRIITG 310
             G G+EL +IAA VIGG SL GG G+++    G+ ++SV+ + L  +  S   + +I G
Sbjct: 252 TFGVGMELNIIAAAVIGGASLNGGSGTILGAILGIALLSVVTSSLILLDVSVYWQDMIKG 311

Query: 311 AVIVIAVVLDTYRSRR 326
            +++ AV +D   ++R
Sbjct: 312 CILLAAVSIDHLLNKR 327