Pairwise Alignments

Query, 524 a.a., ribose ABC transporter - ATP-binding subunit from Pseudomonas putida KT2440

Subject, 500 a.a., ribose import ATP-binding protein RbsA from Vibrio cholerae E7946 ATCC 55056

 Score =  328 bits (840), Expect = 4e-94
 Identities = 201/494 (40%), Positives = 303/494 (61%), Gaps = 8/494 (1%)

Query: 14  EVVLAASGLGKTY-AQPVLGEVSLSLRAGEVLALTGENGAGKSTLSKLISGLEVPTTGHM 72
           + +LA S + K +     L + SL++  G V+AL GENGAGKSTL K+++G+     G +
Sbjct: 3   QAILALSQIEKAFPGVKALDKASLNVYPGRVMALMGENGAGKSTLMKVLTGIYSKDAGSI 62

Query: 73  TYRGQAYAPGSRGEAERLGVRMVMQELNLLPTLTVAENLFLDN-LPSRFGWISHKRLRQL 131
            Y+GQ  +     +++  G+ ++ QELNL+P LT+AEN+FL   + S FG I    + + 
Sbjct: 63  EYQGQPVSFKGPRDSQLAGISIIHQELNLIPQLTIAENIFLGREMTSPFGRILWDEMHRK 122

Query: 132 ATAAMARVGLDAIDPDTPVGELGIGHQQMVEIARNLIGDCHVLILDEPTAMLTAREVALL 191
           A   +AR+ +      T +GEL +G QQMVEIA+ L  +  V+I+DEPT  LT  E   L
Sbjct: 123 ADQLLARLNVKH-SAKTLLGELSLGEQQMVEIAKALSFESKVIIMDEPTDALTDTETESL 181

Query: 192 FTQIERLRARGVAIVYISHRLEELQRVAQRIVVLRDGKLVCDEPIQRYSSAELVNLMVGR 251
           F  I  LR +G  IVYISHRL+E+  +   I VLRDGK + +  +   +   L+ +MVGR
Sbjct: 182 FNVINELREQGCGIVYISHRLKEIFEICDDITVLRDGKFIGECRVCDTNEDGLIEMMVGR 241

Query: 252 ELGEHIDLGRRQLGAPLLKVDKLCRGDKVREVSFEVRAGEIFGISGLIGAGRTELLRLIY 311
           +L E       Q G   L+V  L  G  V +VSF ++ GEI G+SGL+GAGRTEL+++IY
Sbjct: 242 KLEEQYPRIAAQQGDISLEVIGLT-GSGVHDVSFTLKKGEILGVSGLMGAGRTELMKVIY 300

Query: 312 GADRADSGGIALGQPPQAVSIDSPKAAVRAGIALITEDRKGEGLLLTQSISANIALGNLG 371
           GA  ++ G I L    + V+  SP+  +  GIA I+EDRKG+GL+L  S+  N++L  L 
Sbjct: 301 GALPSERGVINLNG--RTVNPVSPQDGLANGIAYISEDRKGDGLVLGLSVKENMSLCALD 358

Query: 372 AVSRAGVLDSEAEKALA-ERQIQAMRIRSAGAQQVVGELSGGNQQKVVIGRWLERDCQVL 430
            +S+ GV    A++ +A +  I+   I++   +Q++G LSGGNQQKV I + L    +VL
Sbjct: 359 QLSK-GVQIRHADEVIAVDDFIRLFNIKTPSREQIIGNLSGGNQQKVAIAKGLMTKPKVL 417

Query: 431 LFDEPTRGIDVGAKFDIYGLLAELARQGKALVVVSSDLRELMLICDRIAVLSAGRLIDTF 490
           + DEPTRG+DVGAK +IY L+ +   +G ++++VSS++ E++ + DRI V+  GR+   F
Sbjct: 418 ILDEPTRGVDVGAKKEIYQLINQFKAEGMSIILVSSEMPEVLGMSDRILVMHEGRISGEF 477

Query: 491 ARDHWSQDQLLAAA 504
                 Q++L+A A
Sbjct: 478 MASEADQEKLMACA 491



 Score = 77.8 bits (190), Expect = 9e-19
 Identities = 59/224 (26%), Positives = 110/224 (49%), Gaps = 5/224 (2%)

Query: 33  EVSLSLRAGEVLALTGENGAGKSTLSKLISGLEVPTTGHMTYRGQAYAPGSRGEAERLGV 92
           +VS +L+ GE+L ++G  GAG++ L K+I G      G +   G+   P S  +    G+
Sbjct: 271 DVSFTLKKGEILGVSGLMGAGRTELMKVIYGALPSERGVINLNGRTVNPVSPQDGLANGI 330

Query: 93  RMVMQELN---LLPTLTVAENLFLDNLPSRFGWISHKRLRQ-LATAAMARV-GLDAIDPD 147
             + ++     L+  L+V EN+ L  L      +  +   + +A     R+  +     +
Sbjct: 331 AYISEDRKGDGLVLGLSVKENMSLCALDQLSKGVQIRHADEVIAVDDFIRLFNIKTPSRE 390

Query: 148 TPVGELGIGHQQMVEIARNLIGDCHVLILDEPTAMLTAREVALLFTQIERLRARGVAIVY 207
             +G L  G+QQ V IA+ L+    VLILDEPT  +       ++  I + +A G++I+ 
Sbjct: 391 QIIGNLSGGNQQKVAIAKGLMTKPKVLILDEPTRGVDVGAKKEIYQLINQFKAEGMSIIL 450

Query: 208 ISHRLEELQRVAQRIVVLRDGKLVCDEPIQRYSSAELVNLMVGR 251
           +S  + E+  ++ RI+V+ +G++  +         +L+   VGR
Sbjct: 451 VSSEMPEVLGMSDRILVMHEGRISGEFMASEADQEKLMACAVGR 494