Pairwise Alignments

Query, 524 a.a., ribose ABC transporter - ATP-binding subunit from Pseudomonas putida KT2440

Subject, 501 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  370 bits (951), Expect = e-107
 Identities = 209/493 (42%), Positives = 304/493 (61%), Gaps = 10/493 (2%)

Query: 15  VVLAASGLGKTYAQ-PVLGEVSLSLRAGEVLALTGENGAGKSTLSKLISGLEVPTTGHMT 73
           V+++ SG+ K ++    L  V   LRAGEV AL GENGAGKSTL ++++G   PT+G ++
Sbjct: 3   VLVSLSGISKNFSGVQALKGVDFDLRAGEVHALVGENGAGKSTLMRVLAGEMKPTSGTVS 62

Query: 74  YRGQAYA-PGSRGEAERLGVRMVMQELNLLPTLTVAENLFLDNLPSRFGWISHKRLRQLA 132
             G+     G RG A R G+ ++ QEL L P LTVAEN+FL  LP     ++H+RLR+ A
Sbjct: 63  IHGETMQHSGPRGAAGR-GISVIHQELALAPDLTVAENIFLGRLPRI---VNHRRLRKAA 118

Query: 133 TAAMARVGLDAIDPDTPVGELGIGHQQMVEIARNLIGDCHVLILDEPTAMLTAREVALLF 192
           +  + R+G D IDP    G L + HQQ+VEIA+ L     +++ DEPTA+L   +   L 
Sbjct: 119 SEILERLGFD-IDPAIHAGRLTVAHQQVVEIAKALSNRARIIVFDEPTAVLANTDAERLL 177

Query: 193 TQIERLRARGVAIVYISHRLEELQRVAQRIVVLRDGKLVCDEPIQRYSSAELVNLMVGRE 252
             I  LRA G   VYISHRL E+  ++ RI V++DG  V            ++  MVGR+
Sbjct: 178 AIIRELRAGGTGAVYISHRLNEVFDLSDRITVMKDGSHVETLETSATDVDAVIARMVGRQ 237

Query: 253 LGEHI-DLGRRQLGAPLLKVDKLCRGDKVREVSFEVRAGEIFGISGLIGAGRTELLRLIY 311
           +         R  G  +++V  + RG KVR+VSF VRAGE+ G+ GL+G+GRTE+ RL++
Sbjct: 238 MSALFPSKAGRVPGEVVVRVRNVSRGRKVRDVSFSVRAGEVVGLGGLVGSGRTEVARLVF 297

Query: 312 GADRADSGGIALGQPPQAVSIDSPKAAVRAGIALITEDRKGEGLLLTQSISANIALGNLG 371
           GAD+ DSG + L   P  + + SP+ AVRA I L+ EDRK +G++L   I  N  L  + 
Sbjct: 298 GADKMDSGTVELNGKP--LHLSSPREAVRARIGLVPEDRKQQGVILDAPIRINTTLAKIR 355

Query: 372 AVSRAGVLDSEAEKALAERQIQAMRIRSAGAQQVVGELSGGNQQKVVIGRWLERDCQVLL 431
           ++SR G LD+  E+ +A      MR++++     V  LSGGNQQKV + +W   DC +L+
Sbjct: 356 SISRLGFLDAGKERQVAVALGAEMRLKASSVDAPVSSLSGGNQQKVALAKWFHADCDLLI 415

Query: 432 FDEPTRGIDVGAKFDIYGLLAELARQGKALVVVSSDLRELMLICDRIAVLSAGRLIDTFA 491
            DEPTRG+DVGAK +IY L+ +LA+ GKA++V+SS+ +EL  ICDR+ V++ G ++    
Sbjct: 416 LDEPTRGVDVGAKGEIYNLINDLAKAGKAILVISSEHQELFGICDRVLVMAEGAIVGELT 475

Query: 492 RDHWSQDQLLAAA 504
              +++ QLL  A
Sbjct: 476 ESKFTEQQLLTLA 488



 Score = 98.6 bits (244), Expect = 5e-25
 Identities = 69/228 (30%), Positives = 115/228 (50%), Gaps = 5/228 (2%)

Query: 33  EVSLSLRAGEVLALTGENGAGKSTLSKLISGLEVPTTGHMTYRGQAYAPGSRGEAERLGV 92
           +VS S+RAGEV+ L G  G+G++ +++L+ G +   +G +   G+     S  EA R  +
Sbjct: 268 DVSFSVRAGEVVGLGGLVGSGRTEVARLVFGADKMDSGTVELNGKPLHLSSPREAVRARI 327

Query: 93  RMV-----MQELNLLPTLTVAENLFLDNLPSRFGWISHKRLRQLATAAMARVGLDAIDPD 147
            +V      Q + L   + +   L      SR G++   + RQ+A A  A + L A   D
Sbjct: 328 GLVPEDRKQQGVILDAPIRINTTLAKIRSISRLGFLDAGKERQVAVALGAEMRLKASSVD 387

Query: 148 TPVGELGIGHQQMVEIARNLIGDCHVLILDEPTAMLTAREVALLFTQIERLRARGVAIVY 207
            PV  L  G+QQ V +A+    DC +LILDEPT  +       ++  I  L   G AI+ 
Sbjct: 388 APVSSLSGGNQQKVALAKWFHADCDLLILDEPTRGVDVGAKGEIYNLINDLAKAGKAILV 447

Query: 208 ISHRLEELQRVAQRIVVLRDGKLVCDEPIQRYSSAELVNLMVGRELGE 255
           IS   +EL  +  R++V+ +G +V +    +++  +L+ L + R   E
Sbjct: 448 ISSEHQELFGICDRVLVMAEGAIVGELTESKFTEQQLLTLAMTRSARE 495