Pairwise Alignments

Query, 524 a.a., ribose ABC transporter - ATP-binding subunit from Pseudomonas putida KT2440

Subject, 497 a.a., sugar uptake ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  336 bits (861), Expect = 1e-96
 Identities = 197/494 (39%), Positives = 285/494 (57%), Gaps = 8/494 (1%)

Query: 15  VVLAASGLGKTY-AQPVLGEVSLSLRAGEVLALTGENGAGKSTLSKLISGLEVPTTGHMT 73
           ++L+  G+ K++   P L   SL +   EV+AL G+NGAGKSTL K+++G      G + 
Sbjct: 1   MLLSMQGICKSFNGIPALRAASLEVGEAEVMALVGQNGAGKSTLIKILTGAYRRDEGAVV 60

Query: 74  YRGQAYAPGSRGEAERLGVRMVMQELNLLPTLTVAENLFLDNLPSRFGWISHKRLRQLAT 133
           + G+  +     E++  G+  + QE+NL P  +VAEN++L   P RFG I  + +R  A 
Sbjct: 61  FAGEGVSFSMPAESQARGIATIYQEINLAPQRSVAENIYLSREPRRFGLIDRRAMRDGAA 120

Query: 134 AAMARVGLDAIDPDTPVGELGIGHQQMVEIARNLIGDCHVLILDEPTAMLTAREVALLFT 193
           A +    L+ ID D PV       +QMV IAR +     ++I+DEPT+ L  REV +LF 
Sbjct: 121 AVLRAFNLE-IDVDQPVAGFSAATRQMVAIARAVTQKARLVIMDEPTSSLDEREVGILFD 179

Query: 194 QIERLRARGVAIVYISHRLEELQRVAQRIVVLRDGKLVCDEPIQRYSSAELVNLMVGREL 253
            I  L+  GV++V+I HRLEEL R+  R+ ++RDGK V    +       LV  M+G+EL
Sbjct: 180 TIRTLKRGGVSVVFIGHRLEELYRICDRVTIMRDGKTVATAAMADMPKLALVRHMLGKEL 239

Query: 254 GEHIDLGR-RQLGAPL---LKVDKLCRGDKVREVSFEVRAGEIFGISGLIGAGRTELLRL 309
                + +    GA     L V     G +VR+VS  VR GEI G++GL+G+GRTE   L
Sbjct: 240 AAFEAIAKDADEGAQRPVRLSVRNAGAGVRVRDVSLTVREGEISGLAGLLGSGRTETANL 299

Query: 310 IYGADRADSGGIALGQPPQAVSIDSPKAAVRAGIALITEDRKGEGLLLTQSISANIALGN 369
           I+GADR   G I      +A     P  A+  GI L+ EDRK +G++   SI  N+ L  
Sbjct: 300 IFGADRLQRGEIRYNGEARAYR--QPADAIADGIGLVAEDRKVDGIIPDMSIRENMTLAL 357

Query: 370 LGAVSRAGVLDSEAEKALAERQIQAMRIRSAGAQQVVGELSGGNQQKVVIGRWLERDCQV 429
           L  ++RAG++D   +  + ER I A+ I+     Q + ELSGGNQQKV++GRWL  D ++
Sbjct: 358 LPKLARAGIVDRARQDEIVERYITALAIKCTSPDQPIKELSGGNQQKVLLGRWLCTDPKL 417

Query: 430 LLFDEPTRGIDVGAKFDIYGLLAELARQGKALVVVSSDLRELMLICDRIAVLSAGRLIDT 489
           L+ DEPTRGID+GAK +I  LL  LA +G  ++++SS+L EL+   DR+ VLS G  +  
Sbjct: 418 LIVDEPTRGIDIGAKSEILRLLRRLADEGLGVLMISSELEELLAAADRVTVLSDGTSVAV 477

Query: 490 FARDHWSQDQLLAA 503
             R   S+  L AA
Sbjct: 478 LPRKELSEAALFAA 491



 Score =  104 bits (259), Expect = 9e-27
 Identities = 69/221 (31%), Positives = 112/221 (50%), Gaps = 5/221 (2%)

Query: 33  EVSLSLRAGEVLALTGENGAGKSTLSKLISGLEVPTTGHMTYRGQAYAPGSRGEAERLGV 92
           +VSL++R GE+  L G  G+G++  + LI G +    G + Y G+A A     +A   G+
Sbjct: 272 DVSLTVREGEISGLAGLLGSGRTETANLIFGADRLQRGEIRYNGEARAYRQPADAIADGI 331

Query: 93  RMVMQELN---LLPTLTVAENLFLDNLP--SRFGWISHKRLRQLATAAMARVGLDAIDPD 147
            +V ++     ++P +++ EN+ L  LP  +R G +   R  ++    +  + +    PD
Sbjct: 332 GLVAEDRKVDGIIPDMSIRENMTLALLPKLARAGIVDRARQDEIVERYITALAIKCTSPD 391

Query: 148 TPVGELGIGHQQMVEIARNLIGDCHVLILDEPTAMLTAREVALLFTQIERLRARGVAIVY 207
            P+ EL  G+QQ V + R L  D  +LI+DEPT  +     + +   + RL   G+ ++ 
Sbjct: 392 QPIKELSGGNQQKVLLGRWLCTDPKLLIVDEPTRGIDIGAKSEILRLLRRLADEGLGVLM 451

Query: 208 ISHRLEELQRVAQRIVVLRDGKLVCDEPIQRYSSAELVNLM 248
           IS  LEEL   A R+ VL DG  V   P +  S A L   M
Sbjct: 452 ISSELEELLAAADRVTVLSDGTSVAVLPRKELSEAALFAAM 492