Pairwise Alignments

Query, 524 a.a., ribose ABC transporter - ATP-binding subunit from Pseudomonas putida KT2440

Subject, 504 a.a., sugar uptake ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  352 bits (903), Expect = e-101
 Identities = 201/479 (41%), Positives = 294/479 (61%), Gaps = 8/479 (1%)

Query: 31  LGEVSLSLRAGEVLALTGENGAGKSTLSKLISGLEVPTTGHMTYRGQAYAPGSRGEAERL 90
           L  V+  +R GEV AL GENGAGKSTL +++ G  +P+ G +   G+        +A  L
Sbjct: 21  LRSVNFDVRPGEVHALLGENGAGKSTLMRVLGGEIIPSQGEVVINGKRTELRDPRDARAL 80

Query: 91  GVRMVMQELNLLPTLTVAENLFLDNLPSRFGWISHKRLRQLATAAMARVGLDAIDPDTPV 150
           G+ ++ QEL L P L+VAEN+FL  LP+    IS   LR+ A   + R+G D IDP   V
Sbjct: 81  GIVVIHQELALAPDLSVAENIFLGELPTL---ISRFSLRRRAKQLIDRLGFD-IDPGRLV 136

Query: 151 GELGIGHQQMVEIARNLIGDCHVLILDEPTAMLTAREVALLFTQIERLRARGVAIVYISH 210
           G L + HQQ+VEIA+ L  D  +++ DEPTA+L A++   L   I  LR RGV IVYISH
Sbjct: 137 GTLSVAHQQVVEIAKALSQDIKIIVFDEPTAVLGAQDAMKLHQIIRGLRDRGVGIVYISH 196

Query: 211 RLEELQRVAQRIVVLRDGKLVCDEPIQRYSSAELVNLMVGRELGEHI-DLGRRQLGAPLL 269
           RL+E+  +A R+ V++DG+ V           +++ +MVGR +     +  +R +GA LL
Sbjct: 197 RLDEVFDIADRMTVMKDGETVGTVATTDVKIDDIIRMMVGRPIANMFPERSQRTIGAELL 256

Query: 270 KVDKLCRGDKVREVSFEVRAGEIFGISGLIGAGRTELLRLIYGADRADSGGIALGQPPQA 329
            V KL  G  VR+VSF VRAGEI G+ GLIG+GRTE+ R I+GAD  DSG I+L    +A
Sbjct: 257 NVKKLNAGRMVRDVSFSVRAGEIVGLGGLIGSGRTEVARAIFGADPLDSGTISL--KGKA 314

Query: 330 VSIDSPKAAVRAGIALITEDRKGEGLLLTQSISANIALGNLGAVSRA-GVLDSEAEKALA 388
           + + SP+ AV+AGI L+ EDRK  G+++ + I  N  +  + +V  A G L    E+   
Sbjct: 315 LKLKSPRDAVKAGIGLVPEDRKEHGVVIDKPIRVNATMARMSSVVNALGFLKPALERTDV 374

Query: 389 ERQIQAMRIRSAGAQQVVGELSGGNQQKVVIGRWLERDCQVLLFDEPTRGIDVGAKFDIY 448
               +++R++++     V  LSGGNQQKVV+ +W      V++ DEPTRG+DVGAK +IY
Sbjct: 375 TALGKSLRLKASSIDAPVSSLSGGNQQKVVLAKWFHAGGDVIILDEPTRGVDVGAKAEIY 434

Query: 449 GLLAELARQGKALVVVSSDLRELMLICDRIAVLSAGRLIDTFARDHWSQDQLLAAAFAG 507
            L+ +LA  GKA++V+SS+ +EL  +CDR+  +  G++       ++S++ LL  +  G
Sbjct: 435 ALINKLAEDGKAVLVISSEHQELFGLCDRVLAMGQGQIRGELTPSNYSEENLLGLSMMG 493



 Score = 79.3 bits (194), Expect = 3e-19
 Identities = 61/230 (26%), Positives = 111/230 (48%), Gaps = 6/230 (2%)

Query: 24  KTYAQPVLGEVSLSLRAGEVLALTGENGAGKSTLSKLISGLEVPTTGHMTYRGQAYAPGS 83
           K  A  ++ +VS S+RAGE++ L G  G+G++ +++ I G +   +G ++ +G+A    S
Sbjct: 260 KLNAGRMVRDVSFSVRAGEIVGLGGLIGSGRTEVARAIFGADPLDSGTISLKGKALKLKS 319

Query: 84  RGEAERLGVRMVMQELNL------LPTLTVAENLFLDNLPSRFGWISHKRLRQLATAAMA 137
             +A + G+ +V ++          P    A    + ++ +  G++     R   TA   
Sbjct: 320 PRDAVKAGIGLVPEDRKEHGVVIDKPIRVNATMARMSSVVNALGFLKPALERTDVTALGK 379

Query: 138 RVGLDAIDPDTPVGELGIGHQQMVEIARNLIGDCHVLILDEPTAMLTAREVALLFTQIER 197
            + L A   D PV  L  G+QQ V +A+       V+ILDEPT  +     A ++  I +
Sbjct: 380 SLRLKASSIDAPVSSLSGGNQQKVVLAKWFHAGGDVIILDEPTRGVDVGAKAEIYALINK 439

Query: 198 LRARGVAIVYISHRLEELQRVAQRIVVLRDGKLVCDEPIQRYSSAELVNL 247
           L   G A++ IS   +EL  +  R++ +  G++  +     YS   L+ L
Sbjct: 440 LAEDGKAVLVISSEHQELFGLCDRVLAMGQGQIRGELTPSNYSEENLLGL 489