Pairwise Alignments

Query, 297 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 303 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  142 bits (358), Expect = 9e-39
 Identities = 86/276 (31%), Positives = 141/276 (51%), Gaps = 3/276 (1%)

Query: 2   LNYRQLHYFWAVAKTGSITRASQQLNLTPQTISGQITLFEQTYGLELFQRAGRQLELTET 61
           LN+  LHYFW VAK G +TRA+QQLN++   +S QI   E   G +LF R GR L+LTE 
Sbjct: 17  LNFHHLHYFWTVAKEGHLTRAAQQLNVSQSALSSQIRQLEGQLGHDLFVRQGRSLQLTEV 76

Query: 62  GRQALVYAEQMFQIGSELEAMLRAGPQEQI-LFRVGVADVVPKSIVYRLLAPTMDLEEVL 120
           G   L YAE +F +  EL +++ +G  +++   R+G    + ++     L P +   +V 
Sbjct: 77  GHLVLEYAESIFNLSGELLSIMESGELQRVQQLRIGSVATLSRNFQENFLRPVLGKSDV- 135

Query: 121 RINCREDKLERLLADLAIQRLDLVISDSPMPNHLDIKCYSQKLGECGLSFFATPALAQRL 180
           R+      LE LL  L + +LDL++S+ P+P+        +++ +  +     P+   R 
Sbjct: 136 RLILSSSTLEDLLGQLQMHKLDLILSNRPVPSDSTQPWRCKRIAQQSVCLVGPPSDTLR- 194

Query: 181 EGPFPACLQDAPLLVPGQETVVRSRLLRWLGEQQVQPRIVGEFDDSALMQAFGQSGSGIF 240
              FP  L     LVPG  + +R +   +  +  +      E DD A+++   +   G+ 
Sbjct: 195 RYQFPQDLPKVKTLVPGASSEIRLQFDLYCEQLGLAVTPYAEVDDMAMLRLLARDVEGVT 254

Query: 241 VAPSVIAEEVCRQYGVQLIGQTEAVHESFYAISVER 276
           V P V+ ++      +   G  +AV ESFYAI+ +R
Sbjct: 255 VVPEVVVQDEIETGRLCNYGTLDAVTESFYAITTKR 290