Pairwise Alignments

Query, 403 a.a., Serine/threonine transporter SstT from Pseudomonas putida KT2440

Subject, 424 a.a., proton/glutamate symporter (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  125 bits (314), Expect = 2e-33
 Identities = 104/402 (25%), Positives = 188/402 (46%), Gaps = 32/402 (7%)

Query: 16  QIVIGLLAGIALALLAPAIARDLAFLGKVFVSALKAVAPVLVFILVMASVANHRHGQET- 74
           QI +G++ GI + +     A  L  +G +FV+ +K +   LVF  ++  V +     +  
Sbjct: 8   QIFVGMVLGILVGVTLGEQASYLKPIGTLFVNTIKMLIVPLVFCSLIVGVTSMEDTAKMG 67

Query: 75  ---------HIRPILWLYLLGTFAAAVVAVFASMLFPSHLALSTSEATLSAPGGIAEVLQ 125
                    ++        LG     V+   A +    H A++T++        +  V+Q
Sbjct: 68  RIGFKSFSFYLCTTAIAISLGLVVGYVIQPGAGVPLLQHEAVNTAKE-------VPSVMQ 120

Query: 126 NLLLNAVDNPVNALLNANFIGVLTWAIGLGVALRHAGETTRTVV---EDLSNGVTLIVRV 182
            L+     NPV AL +   + V+ +A+ LG+AL   G+  +  +   E L+  +  +  +
Sbjct: 121 TLIDIVPTNPVAALASGQILQVIVFAVALGIALVLIGDHGKPAIKVFESLAEAMYKLTDM 180

Query: 183 VIRFAPLGIFGLVSSTLAQSGLDALLGYLH-LLAVLIGCMLFVALVMNPLIVFWKIRRNP 241
           V++ AP G+FGL++    + G+D L   +  ++AV IGC++ V L    +++    + NP
Sbjct: 181 VMKLAPYGVFGLMAWVAGEYGIDMLWPLIKVIIAVYIGCIIHV-LGFYSIVLRLFAKLNP 239

Query: 242 YPLTLLCLRESGITAFFTRSSAANIPVNL-ALSERLGLHEDTYSVSIPLGATINMAGAAI 300
                  +  +   AF T SSA  +P ++   SE LG+++   S  +PLG TINM G A+
Sbjct: 240 LHF-FKGISNAMAVAFTTSSSAGTLPASMKCASEYLGVNKKISSFVLPLGTTINMDGTAL 298

Query: 301 TITVLTLAAVHTLGIQVDLPTAVLLSVVAAVCACGASGVAGGSLLLIPLACSLFGIPSEI 360
              V  L      GI +     + + + A + + G +GV G  L+++ L  S  G+P E 
Sbjct: 299 YQGVTALFVAQAFGIDLTWVDYLTIILTATLASIGTAGVPGAGLVMLTLVLSTVGLPLE- 357

Query: 361 AMQVVAVGFIIGV--LQDSAETALNSSTDVLFTAAACQAQEQ 400
                 V  I G+  + D A T +N S D++ T    +++ +
Sbjct: 358 -----GVALIAGIDRILDMARTVVNVSGDLVATTVIAKSENE 394