Pairwise Alignments

Query, 414 a.a., putative Acyl-CoA dehydrogenase from Pseudomonas putida KT2440

Subject, 385 a.a., 2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5) (from data) from Shewanella oneidensis MR-1

 Score =  157 bits (398), Expect = 4e-43
 Identities = 120/400 (30%), Positives = 195/400 (48%), Gaps = 33/400 (8%)

Query: 6   MDFAYSPKVQALRERVTAFMDAHVYPAEAVFERQVAEGDRWQPTAIMEELKAKARAEGLW 65
           MDF ++   +   E    F    + P  A ++ +             +++  KA   G  
Sbjct: 1   MDFNFNEDQRQFAELARQFATDELAPFAAKWDEE---------HHFPKDVIQKAGELGFC 51

Query: 66  NLFLPESEYGAGLSNLEYAPLAEIMGRSLLGPEPFNCSAPDT----GNME--VLVRYGSE 119
           +L+ PESE G GLS L+ + + E + +         C+A        NM   ++  +G+E
Sbjct: 52  SLYSPESEGGMGLSRLDASIIFEELSKG--------CTATTAMLTIHNMATWMVTTWGTE 103

Query: 120 AQKRQWLEPLLRGEIRSAFAMTEPDVASSDATNMAATAIRDGDQWVINGRKWWTSGACDP 179
             ++ W EPL  G++ +++ +TEP  A SDA ++   A+ DGD++V++G K + SGA   
Sbjct: 104 TLRQAWSEPLTTGQMLASYCLTEPG-AGSDAASLQTKAVPDGDEYVVSGSKMFISGAGST 162

Query: 180 RCKV-MIFMGLSDPEGPRHQQHSMVLVPTDTPGVKIVRPLPVFGYDDAPHGHAEVLFENV 238
              V M   G + P+G      S + +P D+ G+   +     G++  P     V F+NV
Sbjct: 163 ELLVVMCRTGQAGPKGI-----SAIAIPADSEGIIYGKAEDKMGWNAQPT--RLVTFDNV 215

Query: 239 RVPYENVILGEGRGFEIAQGRLGPGRIHHCMRSIGMAERALELMCKRSVERTAFGRPLAR 298
           RVP  N++  EG+GF  A   L  GRI+    S+G A+ ALE   +   ER  FG+PLA 
Sbjct: 216 RVPVANLLGEEGQGFTFAMKGLDGGRINIATCSVGTAQAALERASQYMNERQQFGKPLAA 275

Query: 299 LGGNVDKIADSRMEIDMARLLTLKAAYMMDTVGNKVARSEIAQIKVVAPNVALNVIDRAI 358
                 K+AD   E+  AR +   AA+ +D+ G+    +  A  K  A +V   V D A+
Sbjct: 276 FQALQFKLADMATELVAARQMVRLAAFKLDS-GDPEGTAYCAMAKRFATDVGFQVCDAAL 334

Query: 359 QIHGGAGVSGDFPLAYMYAMQRTLRLADGPDEVHRAAIGK 398
           QIHGG G   ++PL   +   R  ++ +G +E+ R  I +
Sbjct: 335 QIHGGYGYIREYPLERHFRDVRVHQILEGTNEIMRLIIAR 374