Pairwise Alignments

Query, 308 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 327 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  146 bits (369), Expect = 6e-40
 Identities = 91/302 (30%), Positives = 150/302 (49%), Gaps = 16/302 (5%)

Query: 3   LSKVDLNLFIVFDAIYTEANLTRAGQIVGITQPAVSNALSRLRETFNDPLFVRTAQGMVP 62
           L+++DLNL +    +  E ++TRA   + ++Q AVS +L++LRE F+DPLFVRT+ G+  
Sbjct: 20  LARIDLNLLVCLKVLIEELSVTRAAARLCLSQSAVSKSLAKLREQFDDPLFVRTSYGLNA 79

Query: 63  TPMAQNIIGPVRNALALLRTSVQESRTFNPQQANKTFRISMTDLTEAVILPPLFQRLRRL 122
           TP A   + P  + L      + +   F+PQ +   F+I+  +    +I+P     + R 
Sbjct: 80  TPKAL-FLKPKLDVLVNQLELLTQPAHFSPQSSEYRFQIAAVESVYPLIMPYFLPTIFRH 138

Query: 123 APAVMIESFLCKRRETTKELAAGRLDFAI--------DAPLNTDP--QVRHIKLMQDRYV 172
            P + I +      +T ++L  G LDF +        DA L   P   +   ++ +D   
Sbjct: 139 GPHLSISTH-AWTEQTFRKLQVGELDFGLTGKDIDINDAKLTLLPPADICEQEIYRDNQR 197

Query: 173 CALRQGHPLADSKLTLDSYLGMTHIHISSRRNGLGYVDLALGKMGVQRKVALRSQHYLMA 232
           C +R+GHP+      L SYL + H+ +    N    +D  L  +G +R +A+    +  A
Sbjct: 198 CVVRRGHPVLQYDWNLSSYLNLRHVQVRCDGNDRWLLDYRLADLGYERDIAITVPDFNSA 257

Query: 233 SQVLQQTDMAMTVPERF----ARRHQLRYQALPVEVPALETHLYWHESTDQDPANRWMRE 288
           + +   TD   T P  F    A++  L    LP+E P +   L+WH   + DPA RW+RE
Sbjct: 258 ASLCTYTDFIFTAPSHFTHWVAKQMDLVELPLPMEFPPMAYTLFWHRERENDPALRWLRE 317

Query: 289 QI 290
            I
Sbjct: 318 LI 319