Pairwise Alignments

Query, 307 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 303 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  187 bits (474), Expect = 3e-52
 Identities = 105/272 (38%), Positives = 156/272 (57%), Gaps = 5/272 (1%)

Query: 1   MLRITDLELFARSSVLGSFTAAAHEAGLLPGQVAAAIKRLERDLDVRLFARTTRSLRLTA 60
           M  I DL+L  R + L S +AA+ E G+ P   +AA++RLE+ L  +LFAR+TR L+LT 
Sbjct: 1   MYHINDLQLALRIAALESLSAASKEVGMTPAAASAALQRLEKKLGCQLFARSTRRLQLTE 60

Query: 61  EGERYLPTALNVLESLRQGHEDLHGNPNSLRGTLQVSAPSDMGRNMLLPWLSAFRRDHPA 120
           EG  +L  A   L  L     +L  +   L+G ++++ PSD+GR+ +  WL       P 
Sbjct: 61  EGRIFLDAAKPALALLETASANLAEHRGELKGEVRLALPSDIGRSRIRYWLDELMDSAPE 120

Query: 121 LQLRFFLSDQMADLNRDPVDVAIRYGLNQDANYIALPLAEWNRRVLVASPDYLARHGRPL 180
           L ++ +  D M DL    + +A+RYG  +D+N     L+    RVLVASP YLA++G PL
Sbjct: 121 LSIQLYFGDHMTDLIDQNIHLALRYGQLEDSNLKRRQLS-MTPRVLVASPAYLAQYGEPL 179

Query: 181 TPDALQQHACLLYMQHSRVYDKWQLGNR----TVQVRGPLVSDDADVIRRLAIQGEGIVY 236
           T + L QH+ L+  +    + KW+  +      ++VRG    +D  VIR  A+ G GI Y
Sbjct: 180 TLNELSQHSVLILNRGGEPWQKWKFSHNGEAVEIEVRGKRFCNDGAVIRDWALDGRGIAY 239

Query: 237 KSWLDVSANIAAGELEIVLPELIGEPTPLALV 268
           KSWLDV+ ++  G L++VL + I  P PL LV
Sbjct: 240 KSWLDVAQDVTEGRLKLVLADKIAPPIPLQLV 271