Pairwise Alignments

Query, 276 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 189 a.a., L-rhamnose operon transcriptional activator RhaR from Pseudomonas fluorescens FW300-N2E2

 Score = 85.1 bits (209), Expect = 1e-21
 Identities = 54/193 (27%), Positives = 92/193 (47%), Gaps = 15/193 (7%)

Query: 82  YSTLYLEPAWLDQQLRALYEHAPGDSLPSFADTLCHDERLARATALAFRAVHDQDLRIVR 141
           Y  LY++P W+++ +         D +  F   L      AR      + +      + R
Sbjct: 2   YRMLYIDPEWVNRMV--FQGRFTDDHIHLFQTALSQAPDFARTFLHQHQIIEKSPSSLER 59

Query: 142 QTAMDDLLACLTRHLHWRRRINPDPRLPLTA------QRARDFLHANLERDIGLEDLAQA 195
           +T + DL+  L          +  P  P++A      Q+ +  L    ++ + LE+LAQ 
Sbjct: 60  ETILLDLVTQLFER-------SGAPIEPVSAAEQHAVQKIKRKLEDEFDKHLSLEELAQL 112

Query: 196 CGIDRFRLTRAFKAAFGIAPHAYLIQLRLARARRLLAQGQTPAEVAVALGFADQSHLGRW 255
             +D   L R FK + G++PH+Y IQ R+A+ ++LL  G + AE +   GF DQSH+ R 
Sbjct: 113 VNLDPLYLIRVFKKSVGVSPHSYQIQKRIAQVQKLLRTGSSLAEASFTCGFFDQSHMTRA 172

Query: 256 FRRAYQLTPADYR 268
           F++   +TP  +R
Sbjct: 173 FKKVVGITPGSFR 185