Pairwise Alignments

Query, 276 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 278 a.a., Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain from Pseudomonas stutzeri RCH2

 Score = 71.6 bits (174), Expect = 2e-17
 Identities = 67/223 (30%), Positives = 102/223 (45%), Gaps = 18/223 (8%)

Query: 59  GQVFLLEPGDIHDGLAPTEEG--FTYSTLYLEPAWLDQQLRALYEHAPGDSLPSFADTL- 115
           G  FL +  + ++    T EG  F    LYL    ++Q  R L    P  S  +  D   
Sbjct: 61  GDFFLTDTQEPYEMRWQTLEGERFEVMHLYLGLPLIEQAARELL--GPQSSAVALLDVSG 118

Query: 116 CHDERLARATALAFRAVHDQDLRIVRQTAMDDLLACLTRHL--HWR------RRINPDPR 167
             DE +        R + DQ  R   Q  +  L   L  HL  H+R      R  N  P 
Sbjct: 119 ARDETVHWLMESMRRELLDQ--RTPSQLCLRGLAQTLAMHLLRHYRDPQGAIRSSNALPA 176

Query: 168 LPLTAQRARDFLHANLERDIGLEDLAQACGIDRFRLTRAFKAAFGIAPHAYLIQLRLARA 227
             L  +R  + ++A L  D  L  LA++  +  +  +R FK A G++P  Y I LR+ARA
Sbjct: 177 YKL--RRVVEEMNAQLADDFSLTRLARSAELSEYHFSRMFKRATGLSPSQYFIGLRMARA 234

Query: 228 RRLLAQGQTPA-EVAVALGFADQSHLGRWFRRAYQLTPADYRR 269
           R+LL + Q    ++ + +G++  SH  + FRR   +TP+ YR+
Sbjct: 235 RQLLIETQRSVIDIGLEVGYSSPSHFSQVFRREVGVTPSAYRQ 277