Pairwise Alignments

Query, 276 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 270 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  113 bits (282), Expect = 5e-30
 Identities = 74/265 (27%), Positives = 126/265 (47%), Gaps = 11/265 (4%)

Query: 5   IDFKQDADTGIESVRAHFVGHAYDPHWHDSFLVGVTEQGVQQFNCRRVRHRSTPGQVFLL 64
           ++++  A   I  + A +   A++ H+H    +G+  QGVQ+F  +   H+   G V L+
Sbjct: 7   VNYRPSAYPAISLIEADYRQFAFERHYHLDIHIGLITQGVQRFYHQGAWHQVGQGGVVLM 66

Query: 65  EPGDIHDGLAPTEEGFTYSTLYLEPAWLDQQLRALYEHAPGDSLPSFADTLCHDERLARA 124
            P ++HDG A +  G+      +EP WL Q L A       + +  F   +  D  L  +
Sbjct: 67  SPDELHDGHAHSNTGYQVQVFSIEPEWLQQTLEANQI----EQVIGFEQLIVQDPTLFHS 122

Query: 125 TALAFRAVHDQDLRIVRQTAMDDL----LACLTRHLHWRRRINPDPRLPLTAQRARDFLH 180
                  +   +L    Q A D L     A L     + ++    P         ++++ 
Sbjct: 123 LQQLHHLLRQDNLS---QLAKDCLPYQGFAPLLERYSYLKQPTVKPLGQHNLALLKEWVL 179

Query: 181 ANLERDIGLEDLAQACGIDRFRLTRAFKAAFGIAPHAYLIQLRLARARRLLAQGQTPAEV 240
           + L++ I LE LAQ C +   +  R FKA  G+ P+A+L +LRL +A +LL  G+   +V
Sbjct: 180 SQLDQPIRLEQLAQLCQLSPTQFQRHFKAQTGLTPYAWLRRLRLEQAMKLLQSGKPGTDV 239

Query: 241 AVALGFADQSHLGRWFRRAYQLTPA 265
           A  +GF DQ+H  + F+  Y L+P+
Sbjct: 240 AYQVGFYDQAHFSKAFKATYGLSPS 264