Pairwise Alignments

Query, 301 a.a., putative transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 315 a.a., Transcriptional regulator, AraC family from Pseudomonas fluorescens FW300-N2E2

 Score =  157 bits (398), Expect = 2e-43
 Identities = 93/285 (32%), Positives = 148/285 (51%), Gaps = 3/285 (1%)

Query: 11  APLCSLIRSLTTRPGFVPTLLPQVQVLSWDHYVASSPQIYEPSLMIVAQGSKLARLGPRT 70
           A L SL++      G  PT +  + ++  D    +   +++P L ++ +G K  RL    
Sbjct: 20  AELASLMKRFAPEYGVHPTAIEALHLIRSDQPTEALHTVHKPGLCVIIEGRKEVRLADEC 79

Query: 71  LEYGAGHYLVQALSVPFMCETF-ATREAPLLGVAVGIDRGVLGELVQSMGLAPDAEVQAQ 129
             Y   +YLV ++++P   +   A+ E P L + + ID   +  L+     +P      +
Sbjct: 80  YVYDPLNYLVVSVTLPLAGQVIEASPERPYLCIRLDIDPAQICRLIADA--SPIGVPTER 137

Query: 130 TPQSMTSAALDAPMRESVERLLHCLQDPLDAKVLGPARVREVLYTALRGPQAGVLRALVE 189
           T + +    +DAP+ ++V RLL  L  P D   L P   +E+ Y  LRG Q   L  +  
Sbjct: 138 TGRGLFLDRIDAPLLDAVLRLLRLLDSPDDIATLAPLAQQEIFYRLLRGAQGQRLHEIAI 197

Query: 190 QQGHFARIGAALAHLREHYAEPLSVEALAARANMSVSTFHEHFKRCTDMAPMQYLKRLRL 249
                 RI  A+  L  HYAEPLS+++LA   N+S S  H  FK  T M+P+QY K+LRL
Sbjct: 198 PDTQTHRISRAIEWLNTHYAEPLSIDSLAQMINLSPSALHHRFKAVTAMSPLQYQKQLRL 257

Query: 250 LKAQQMLIGEGLGVAQAAHRVGYQSTSQFSREYKRQFERSPGDEL 294
            +A+++L+ E   V+   +++GY+S SQFSREY R F  SP  ++
Sbjct: 258 QEARRLLLAENSDVSSIGYKMGYESPSQFSREYSRLFGASPSKDI 302