Pairwise Alignments

Query, 301 a.a., putative transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 309 a.a., Transcriptional regulator, AraC family from Pseudomonas fluorescens FW300-N2E2

 Score =  166 bits (420), Expect = 6e-46
 Identities = 104/292 (35%), Positives = 149/292 (51%), Gaps = 3/292 (1%)

Query: 11  APLCSLIRSLTTRPGFVPTLLPQVQVLSWDHYVASSPQIYEPSLMIVAQGSKLARLGPRT 70
           A L S+I   T+  G   T +  + +         +P + +P+L I+AQGSK  RL    
Sbjct: 20  AELASIIDRNTSEDGSYATAIGSLNLSRHSQPHKFAPVLAQPALCIMAQGSKQVRLADEL 79

Query: 71  LEYGAGHYLVQALSVPFM-CETFATREAPLLGVAVGIDRGVLGELVQSMGLAPDAEVQAQ 129
             Y   HYLV ++S+P   C    + E P+L + + ID   +  L+   G  P       
Sbjct: 80  FNYDPLHYLVVSVSMPLSGCIADVSPEQPILALRLDIDPAEITALIADAG--PLGVPTRP 137

Query: 130 TPQSMTSAALDAPMRESVERLLHCLQDPLDAKVLGPARVREVLYTALRGPQAGVLRALVE 189
             + +    LD PM ++V RL   L  P D  +L P   RE+LY  LR PQ   L  +  
Sbjct: 138 AGRGLYVERLDTPMLDAVLRLARLLDTPKDIAMLAPLVRREILYRLLRSPQGYRLYEIAI 197

Query: 190 QQGHFARIGAALAHLREHYAEPLSVEALAARANMSVSTFHEHFKRCTDMAPMQYLKRLRL 249
                 RI  A+  L  H+ +PL ++ LA   N+SVST H  FK  T M+P+QY K+LRL
Sbjct: 198 ANSQSHRISQAIKWLNGHFEQPLRIDDLAREVNLSVSTLHHRFKAMTAMSPLQYQKQLRL 257

Query: 250 LKAQQMLIGEGLGVAQAAHRVGYQSTSQFSREYKRQFERSPGDELPYQSMPV 301
            +A+++++ EGL  + A +RVGY+S SQFSREY R F   P  +L    M V
Sbjct: 258 QEARRLMLAEGLEASAAGYRVGYESPSQFSREYSRLFGAPPLRDLARLRMTV 309