Pairwise Alignments

Query, 301 a.a., putative transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 312 a.a., Hypothetical transcriptional regulator YqhC from Pseudomonas fluorescens FW300-N2E2

 Score =  191 bits (485), Expect = 2e-53
 Identities = 109/288 (37%), Positives = 163/288 (56%), Gaps = 6/288 (2%)

Query: 11  APLCSLIRSLTTRPGFVPTLLPQVQVLSWDHYVASSPQIYEPSLMIVAQGSKLARLGPRT 70
           A + +L+  L    G+  + L  V+ L  +  ++ +P +Y+P ++I+ QG K   LG   
Sbjct: 9   ARMVALMERLAPVEGYNLSALEDVRFLRSNRPLSRTPVLYDPGVVILCQGRKRGYLGNDL 68

Query: 71  LEYGAGHYLVQALSVPFMCETFATREAPLLGVAVGIDRGVLGELVQSM--GLAPDAEVQA 128
             Y A HYLV ++ VPF  ET A+   P+L V + +D  +  EL+  +   L P      
Sbjct: 69  YVYDARHYLVVSVPVPFTMETDASEAEPMLAVYMRLDLQLASELILQVDEALGPSDA--- 125

Query: 129 QTPQSMTSAALDAPMRESVERLLHCLQDPLDAKVLGPARVREVLYTALRGPQAGVLRALV 188
             P+ M ++ +D  +  S  R L  +  P DA +LGP+ VRE+ Y  L G Q G +RA +
Sbjct: 126 -PPKGMYASPMDDGLYASTLRFLEAMSTPGDAAILGPSLVREIYYRILTGEQGGSMRAAL 184

Query: 189 EQQGHFARIGAALAHLREHYAEPLSVEALAARANMSVSTFHEHFKRCTDMAPMQYLKRLR 248
            +QGHF +I  A+  +   Y E L VEALA  ANMSV +FH HF+  TD +PMQYLK  R
Sbjct: 185 GRQGHFGQITRAIRKIHSSYQERLDVEALAREANMSVPSFHVHFRSVTDASPMQYLKSTR 244

Query: 249 LLKAQQMLIGEGLGVAQAAHRVGYQSTSQFSREYKRQFERSPGDELPY 296
           L +A+ +++   +  + AA  VGY+S SQF RE+KR F R+P  E+ +
Sbjct: 245 LHQARLLMLRNAMNASTAAFSVGYESASQFGREFKRLFGRTPQAEVEW 292