Pairwise Alignments

Query, 301 a.a., putative transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 302 a.a., Transcriptional regulator, AraC family from Pseudomonas fluorescens FW300-N2E2

 Score =  124 bits (311), Expect = 3e-33
 Identities = 77/243 (31%), Positives = 128/243 (52%), Gaps = 3/243 (1%)

Query: 49  IYEPSLMIVAQGSKLARLGPRTLEYGAGHYLVQALSVPFMCE-TFATREAPLLGVAVGID 107
           IY   + +  QG K A LG   L Y  G  +V  + +P +   + A+   P LG+ +  D
Sbjct: 53  IYGLGIGVTLQGRKQAMLGDEILTYAPGQSMVTCVDLPVISHISQASVAKPFLGMMLRFD 112

Query: 108 RGVLGELVQSMGLAPDAEVQAQTPQSMTSAALDAPMRESVERLLHCLQDPLDAKVLGPAR 167
             ++ ++ + M L+      A  P  +T  ALD  + +++ RL+  L +P   + + P  
Sbjct: 113 STMVMQVAERMQLSQRMRDDAFRP--VTVQALDTRVLDALRRLIDLLGEPSLLETVAPLI 170

Query: 168 VREVLYTALRGPQAGVLRALVEQQGHFARIGAALAHLREHYAEPLSVEALAARANMSVST 227
             E++   L G  A  L  ++        I   +A L+ ++ + L ++ LAA+A+MS ST
Sbjct: 171 KEEIIARLLSGAHAPQLLHVIAAGSPSQHIAKTVAWLKLNFRQALRMDDLAAQAHMSPST 230

Query: 228 FHEHFKRCTDMAPMQYLKRLRLLKAQQMLIGEGLGVAQAAHRVGYQSTSQFSREYKRQFE 287
           F +HF+  T M+P+QY K+LRL  A+Q+++ + +  + A   VGY+S SQFSREY R F 
Sbjct: 231 FRQHFRTVTGMSPLQYQKQLRLQAARQLMLSQNVDASSAGGLVGYESASQFSREYSRLFG 290

Query: 288 RSP 290
             P
Sbjct: 291 APP 293