Pairwise Alignments

Query, 301 a.a., putative transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 312 a.a., AraC family transcriptional regulator from Pseudomonas fluorescens FW300-N2C3

 Score =  190 bits (482), Expect = 4e-53
 Identities = 111/294 (37%), Positives = 166/294 (56%), Gaps = 9/294 (3%)

Query: 7   VDA-NAPLCSLIRSLTTRPGFVPTLLPQVQVLSWDHYVASSPQIYEPSLMIVAQGSKLAR 65
           VDA  A +  L+  L    G+  + L  ++ L  +  +  +P +YEP ++I+ QG K   
Sbjct: 4   VDACTARMVRLMEKLAPVEGYNLSALEDIRFLRSNRPLTRTPVLYEPGIVILCQGRKRGY 63

Query: 66  LGPRTLEYGAGHYLVQALSVPFMCETFATREAPLLGVAVGIDRGVLGELVQSMG--LAP- 122
           LG     Y A HYLV ++ VPF  ET A+   P+L V + +D  +  EL+  +   L P 
Sbjct: 64  LGDDVYVYDAQHYLVVSVPVPFTMETDASAAEPMLAVYMRLDLQLASELMLQVDETLGPS 123

Query: 123 DAEVQAQTPQSMTSAALDAPMRESVERLLHCLQDPLDAKVLGPARVREVLYTALRGPQAG 182
           DA+     P+ M ++ +D  +R S  R L  +  P + ++LGP+ +RE+ Y  L G Q G
Sbjct: 124 DAQ-----PKGMYASPMDDLLRTSTLRFLEAMSRPGEGQILGPSLIREIYYRILTGEQGG 178

Query: 183 VLRALVEQQGHFARIGAALAHLREHYAEPLSVEALAARANMSVSTFHEHFKRCTDMAPMQ 242
            +RA + +QGHF +I  A+  +   Y E L VE LA  ANMS+  FH HF+  TD  PMQ
Sbjct: 179 SMRAALSRQGHFGKITRAIRKIHSCYHEHLDVETLAHEANMSIPNFHLHFRSVTDSTPMQ 238

Query: 243 YLKRLRLLKAQQMLIGEGLGVAQAAHRVGYQSTSQFSREYKRQFERSPGDELPY 296
           YLK  RL +A+ +++   +  + AA  VGY+S SQFSRE+KR F R+P  E+ +
Sbjct: 239 YLKSTRLHQARLLMLRNTMSASTAAFNVGYESASQFSREFKRLFGRTPQAEIEW 292