Pairwise Alignments

Query, 301 a.a., putative transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 329 a.a., Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain from Pseudomonas stutzeri RCH2

 Score = 65.5 bits (158), Expect = 2e-15
 Identities = 50/183 (27%), Positives = 80/183 (43%), Gaps = 7/183 (3%)

Query: 117 SMGLAPDAEVQAQT-----PQSMTSAAL--DAPMRESVERLLHCLQDPLDAKVLGPARVR 169
           ++G  P  EVQ        P    +A L   A +   ++  L  ++  L   +      R
Sbjct: 141 ALGTYPAIEVQGDRLHTYDPTDPQAAHLFSSAGVTAGIDLALALVEADLGRALALSVAQR 200

Query: 170 EVLYTALRGPQAGVLRALVEQQGHFARIGAALAHLREHYAEPLSVEALAARANMSVSTFH 229
            V++    G Q      L    G  AR+ A L  +  H  + LS+EALAA+A+M+  T  
Sbjct: 201 LVMFLRRPGGQTQFSPMLTAPSGGVARLAALLEWIPGHLGDDLSIEALAAQAHMTPRTLC 260

Query: 230 EHFKRCTDMAPMQYLKRLRLLKAQQMLIGEGLGVAQAAHRVGYQSTSQFSREYKRQFERS 289
             F + T M P QY++R+RL  A+ +L+     +A  A   G+       R +++    S
Sbjct: 261 RLFSQETGMGPGQYIERVRLEAARNLLLDAQASIATVARLTGFGHPENLRRSFQKHLSVS 320

Query: 290 PGD 292
           P D
Sbjct: 321 PRD 323