Pairwise Alignments

Query, 301 a.a., putative transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 299 a.a., AraC family transcriptional regulator (RefSeq) from Shewanella amazonensis SB2B

 Score =  157 bits (398), Expect = 2e-43
 Identities = 86/243 (35%), Positives = 135/243 (55%), Gaps = 3/243 (1%)

Query: 49  IYEPSLMIVAQGSKLARLGPRTLEYGAGHYLVQALSVPFMCETF-ATREAPLLGVAVGID 107
           + EPS+ +V QG+K   LG ++  Y    +L+ +L +P   +   A+ E P LG+ + +D
Sbjct: 50  VVEPSIALVVQGAKSMTLGEQSYRYDTRRFLITSLDLPAKMQVLEASEEQPYLGIVLKLD 109

Query: 108 RGVLGELVQSMGLAPDAEVQAQTPQSMTSAALDAPMRESVERLLHCLQDPLDAKVLGPAR 167
             ++ EL+  +   P       +  +M        + ++V+RL+  L +P    VL P  
Sbjct: 110 LAMMSELI--LQAPPHPHKDPTSEYAMVLGNTTPSLLDAVQRLVALLDEPESIAVLAPLI 167

Query: 168 VREVLYTALRGPQAGVLRALVEQQGHFARIGAALAHLREHYAEPLSVEALAARANMSVST 227
            +E+ +  L   Q   LR +        RI  ++  L+ HY + LSV+ LA  A MS ST
Sbjct: 168 KQEIFWRVLISEQGSRLRQIASVGSQGLRIAKSIEWLKSHYDQHLSVDGLADLARMSKST 227

Query: 228 FHEHFKRCTDMAPMQYLKRLRLLKAQQMLIGEGLGVAQAAHRVGYQSTSQFSREYKRQFE 287
           FH HF+  T M+P+QY KRLRLL+A+++++GE +  + AA+RVGY+S SQFSREY R F 
Sbjct: 228 FHHHFRALTSMSPLQYQKRLRLLEARRLMLGENMDASAAAYRVGYESPSQFSREYARLFG 287

Query: 288 RSP 290
             P
Sbjct: 288 NPP 290