Pairwise Alignments

Query, 301 a.a., putative transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 313 a.a., AraC family transcriptional regulator from Rahnella sp. WP5

 Score =  200 bits (509), Expect = 3e-56
 Identities = 115/282 (40%), Positives = 162/282 (57%), Gaps = 2/282 (0%)

Query: 13  LCSLIRSLTTRPGFVPTLLPQVQVLSWDHYVASSPQIYEPSLMIVAQGSKLARLGPRTLE 72
           + +L+  LT   G+  T L  V+ L  +  +  +P +YEP ++IV QG K   LG     
Sbjct: 12  MIALLDQLTPHEGYNLTTLADVRFLRSNRPLLRTPVLYEPGIVIVVQGRKRGFLGNDVYL 71

Query: 73  YGAGHYLVQALSVPFMCETFATREAPLLGVAVGIDRGVLGELVQSMGLAPDAEVQAQTPQ 132
           Y A HYL  ++ VPF  ET AT   P+L + + +D  +  EL+  +    DA  Q ++P+
Sbjct: 72  YDAQHYLTVSVPVPFTMETDATASEPMLAIYLRLDFSLAAELMLQLDTY-DAP-QPESPK 129

Query: 133 SMTSAALDAPMRESVERLLHCLQDPLDAKVLGPARVREVLYTALRGPQAGVLRALVEQQG 192
           SM S+ +D  MR  V R L  +  PLDAK+LG A +RE+ Y  L G Q G LR+ +  QG
Sbjct: 130 SMVSSLMDDAMRACVLRFLQVMASPLDAKILGRAMMRELYYRVLTGAQGGTLRSALTLQG 189

Query: 193 HFARIGAALAHLREHYAEPLSVEALAARANMSVSTFHEHFKRCTDMAPMQYLKRLRLLKA 252
            F ++  AL  L   Y   L V ALA  A MS+ TFH HFK  TD +PMQYLK  RL +A
Sbjct: 190 QFGKVVKALRKLHAEYHSHLDVNALAKEAGMSLPTFHSHFKTVTDTSPMQYLKSTRLHQA 249

Query: 253 QQMLIGEGLGVAQAAHRVGYQSTSQFSREYKRQFERSPGDEL 294
           + +++   L  + A+ +VGY+S SQFSRE+KR F  +P  E+
Sbjct: 250 RLLMLRNNLTASAASAQVGYESVSQFSREFKRLFGLTPAREV 291