Pairwise Alignments

Query, 301 a.a., putative transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 311 a.a., AraC family transcriptional regulator from Rahnella sp. WP5

 Score =  210 bits (535), Expect = 3e-59
 Identities = 109/283 (38%), Positives = 173/283 (61%), Gaps = 3/283 (1%)

Query: 13  LCSLIRSLTTRPGFVPTLLPQVQVLSWDHYVASSPQIYEPSLMIVAQGSKLARLGPRTLE 72
           + + +  L+     +P+ +PQV ++    Y    P +Y P ++I+ QG K+  LG +T  
Sbjct: 11  MAARVARLSGDKNLMPSAVPQVTLMYTTRYHPRQPVLYNPGIVILFQGRKVGYLGKKTFS 70

Query: 73  YGAGHYLVQALSVPFMCETFATREAPLLGVAVGIDRGVLGELVQSMGLAPDAEVQAQTPQ 132
           Y   +YL+  + +PF CETF++ E PL G+ + ID  +L +L+  MG   ++ V+ + P 
Sbjct: 71  YDPHNYLMLTVPLPFECETFSSPEEPLAGIQISIDNLMLQDLLMDMG--DESVVRQKEPS 128

Query: 133 S-MTSAALDAPMRESVERLLHCLQDPLDAKVLGPARVREVLYTALRGPQAGVLRALVEQQ 191
           + + S  LD  +  + ERLL  +  PL A++LGP  +RE+L+  L     G L+ALV + 
Sbjct: 129 TGINSGVLDGDILCATERLLDVMDKPLHARILGPKIIREILFFILTSENGGALQALVNRH 188

Query: 192 GHFARIGAALAHLREHYAEPLSVEALAARANMSVSTFHEHFKRCTDMAPMQYLKRLRLLK 251
            HF++I  +L  +   YA+ LSVEALA+  NMS+S FH +FK  T  +P+QYLK  RL +
Sbjct: 189 THFSQIAKSLRRIEAQYADNLSVEALASEVNMSISAFHHNFKAVTSTSPLQYLKTYRLHR 248

Query: 252 AQQMLIGEGLGVAQAAHRVGYQSTSQFSREYKRQFERSPGDEL 294
           A+ ++I +G+  + AA +VGY+S SQFSRE+KR F  +P DE+
Sbjct: 249 ARTLMIFDGVKASVAALQVGYESASQFSREFKRYFGVTPSDEM 291