Pairwise Alignments

Query, 301 a.a., putative transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 299 a.a., AraC family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  121 bits (303), Expect = 2e-32
 Identities = 76/248 (30%), Positives = 131/248 (52%), Gaps = 5/248 (2%)

Query: 49  IYEPSLMIVAQGSKLARLGPRTLEYGAGHYLVQALSVPFMCE-TFATREAPLLGVAVGID 107
           IY  SL ++ QGSK   +  R     AG  ++    +P +   T ATR  P +G+ + +D
Sbjct: 49  IYTLSLSLILQGSKQVAIDDRLRICSAGQSMLTTFDLPVISHVTEATRYHPFIGLVLKLD 108

Query: 108 RGVLGELVQSMGLA-PDAEVQAQTPQSMTSAALDAPMRESVERLLHCLQDPLDAKVLGPA 166
            G++ +    + L  P  +++ Q   ++++  +D  + +++ RLL     P   + L   
Sbjct: 109 YGLIAQTCTELNLERPSKDLRYQ---AISTQDIDTGLCDAMSRLLGLHLTPEYIESLAQL 165

Query: 167 RVREVLYTALRGPQAGVLRALVEQQGHFARIGAALAHLREHYAEPLSVEALAARANMSVS 226
             +E++   L G     LR L        +I   +A +++++A+ + +  LA +A+MS S
Sbjct: 166 YKKEIVIRLLHGSHGMHLRHLASVGSPSRQIVQIVAWMKQNFAQAIGINELADKAHMSAS 225

Query: 227 TFHEHFKRCTDMAPMQYLKRLRLLKAQQMLIGEGLGVAQAAHRVGYQSTSQFSREYKRQF 286
            F +HFK  T  +P+QYLK LRL +A+  ++  GL  +QA+  VGY+S SQFSREY R F
Sbjct: 226 AFRQHFKALTGSSPLQYLKHLRLQEARDQMLLNGLDASQASGVVGYESPSQFSREYSRLF 285

Query: 287 ERSPGDEL 294
              P  ++
Sbjct: 286 GLPPQKDI 293