Pairwise Alignments

Query, 301 a.a., putative transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 299 a.a., AraC family transcriptional regulator from Klebsiella michiganensis M5al

 Score =  210 bits (535), Expect = 3e-59
 Identities = 116/288 (40%), Positives = 167/288 (57%), Gaps = 7/288 (2%)

Query: 11  APLCSL----IRSLTTRPGFVPTLLPQVQVLSWDHYVASSPQIYEPSLMIVAQGSKLARL 66
           A +C L    +  L  +   +  LLP +++L        +P +Y+P ++ +  G K+  +
Sbjct: 4   AEICQLLTHKVNQLKDKEEMLNGLLPDIRLLYGTQPGTRTPVMYQPGIVFLFSGHKIGYI 63

Query: 67  GPRTLEYGAGHYLVQALSVPFMCETFATREAPLLGVAVGIDRGVLGELVQSMGLAPDAEV 126
             RT  Y    YL+  + +PF CETFAT E PL G+ + +D   L EL+  +G   D + 
Sbjct: 64  NERTFRYDTNEYLLLTVPLPFECETFATPEVPLAGIRLNVDILQLQELLMDIG--EDEQF 121

Query: 127 QAQTPQS-MTSAALDAPMRESVERLLHCLQDPLDAKVLGPARVREVLYTALRGPQAGVLR 185
           Q     S + SA L   +  + ERLL  ++ PLDA++LG   +RE+LY  L GP  G L 
Sbjct: 122 QPSMASSGINSAVLSEEILCAAERLLDVMERPLDARILGKQIIREILYHVLTGPCGGALL 181

Query: 186 ALVEQQGHFARIGAALAHLREHYAEPLSVEALAARANMSVSTFHEHFKRCTDMAPMQYLK 245
           ALV +Q HF+ I   L  +   Y E LSV+ LAA ANMSVS FH +FK  T  +P+QYLK
Sbjct: 182 ALVSRQTHFSLISRVLKRIESQYTENLSVDQLAAEANMSVSAFHHNFKSVTSTSPLQYLK 241

Query: 246 RLRLLKAQQMLIGEGLGVAQAAHRVGYQSTSQFSREYKRQFERSPGDE 293
             RL KA+ ++I +G+  + AA RVGY+S SQFSRE+KR F  +PG++
Sbjct: 242 TYRLHKARMLMIHDGMKASAAAMRVGYESASQFSREFKRYFGMTPGED 289