Pairwise Alignments

Query, 301 a.a., putative transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 306 a.a., HTH-type transcriptional activator RhaS from Enterobacter sp. TBS_079

 Score =  222 bits (566), Expect = 7e-63
 Identities = 117/282 (41%), Positives = 175/282 (62%), Gaps = 1/282 (0%)

Query: 13  LCSLIRSLTTRPGFVPTLLPQVQVLSWDHYVASSPQIYEPSLMIVAQGSKLARLGPRTLE 72
           + +L+++L  + G+  T LP V++L  D  +A +P +Y+P ++IV QGSK    G +T  
Sbjct: 4   MITLVKALAVQEGYNLTALPDVRILRADRPLARTPVLYDPGIVIVCQGSKRGFFGQKTYL 63

Query: 73  YGAGHYLVQALSVPFMCETFATREAPLLGVAVGIDRGVLGELVQSMGLAPDAEVQAQTPQ 132
           Y   HYL  ++ VPF+ ET A+ E PLL + + +D  +  EL+  +     A      PQ
Sbjct: 64  YDEQHYLAVSVPVPFVMETDASAEHPLLAIYLHLDFQLAAELMLQIE-QHHAPHPPAAPQ 122

Query: 133 SMTSAALDAPMRESVERLLHCLQDPLDAKVLGPARVREVLYTALRGPQAGVLRALVEQQG 192
           SM S+ +D  ++ +V RLL  L +PL+A +LGPARVRE+ +  L GPQ   +RA +  QG
Sbjct: 123 SMMSSLMDDAVKTAVLRLLEVLNNPLEAAILGPARVRELYFRVLTGPQGKAMRAALALQG 182

Query: 193 HFARIGAALAHLREHYAEPLSVEALAARANMSVSTFHEHFKRCTDMAPMQYLKRLRLLKA 252
            F +IG  L H+   YAEPL++  LA  A MSV TFH HFK  T M PMQY+K +RL +A
Sbjct: 183 QFGKIGKVLQHIHAAYAEPLTLNQLAMEAGMSVPTFHTHFKAITRMPPMQYVKSVRLHQA 242

Query: 253 QQMLIGEGLGVAQAAHRVGYQSTSQFSREYKRQFERSPGDEL 294
           + +++ + +  A A++ VGY+S SQF+RE+KR F   P +E+
Sbjct: 243 RMLMVRQHITAAAASYAVGYESPSQFNREFKRLFGLPPAEEI 284