Pairwise Alignments

Query, 301 a.a., putative transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 302 a.a., AraC family transcriptional regulator (RefSeq) from Shewanella sp. ANA-3

 Score =  159 bits (402), Expect = 8e-44
 Identities = 91/248 (36%), Positives = 138/248 (55%), Gaps = 3/248 (1%)

Query: 44  ASSPQIYEPSLMIVAQGSKLARLGPRTLEYGAGHYLVQALSVPFMCETF-ATREAPLLGV 102
           ++S  I EPS+ +V QG+K   LG + L Y    +L+ +L +P   +   A+ E P LGV
Sbjct: 45  SNSVCIVEPSIAVVVQGAKSMTLGEQVLIYDPSRFLITSLELPATMQVLEASTEKPYLGV 104

Query: 103 AVGIDRGVLGELVQSMGLAPDAEVQAQTPQSMTSAALDAPMRESVERLLHCLQDPLDAKV 162
            + +D  V+ +L+    LA   +    T Q M        +  +  RL+  L +P    V
Sbjct: 105 VLKLDLAVMSDLMLQTPLARQKDTV--TDQGMILGHSTPSLLNAFSRLVALLDEPESIPV 162

Query: 163 LGPARVREVLYTALRGPQAGVLRALVEQQGHFARIGAALAHLREHYAEPLSVEALAARAN 222
           L P   RE+ +  L   Q   LR +V    H  RI  ++  L+ ++A+  S++ LA    
Sbjct: 163 LAPLIKREIFWRVLISEQGARLRQIVSAGSHGLRIAHSIEWLKVNFAQHFSIDDLADMTR 222

Query: 223 MSVSTFHEHFKRCTDMAPMQYLKRLRLLKAQQMLIGEGLGVAQAAHRVGYQSTSQFSREY 282
           MS STFH HF++ T M+P+QY KRLRL++A+++++ E +  A AA+RVGY+S SQFSREY
Sbjct: 223 MSKSTFHHHFRQLTSMSPLQYQKRLRLMEARRLMLSESIDAAAAAYRVGYESPSQFSREY 282

Query: 283 KRQFERSP 290
            R F  SP
Sbjct: 283 SRLFGNSP 290