Pairwise Alignments

Query, 544 a.a., GGDEF family protein from Pseudomonas putida KT2440

Subject, 376 a.a., diguanylate cyclase (GGDEF) domain from Pseudomonas stutzeri RCH2

 Score =  116 bits (290), Expect = 2e-30
 Identities = 88/243 (36%), Positives = 130/243 (53%), Gaps = 20/243 (8%)

Query: 311 ASSAPLALVGSLLL-WWLARTIARPLWKLAAGARTMDRAGT---AEHLHQVRAWYFEAAE 366
           A+ A L+ VG   L ++L R +   ++ L A    +        A H++++R       +
Sbjct: 131 AALAFLSFVGLAALDYYLQRAVDSTVFLLQASVLLVTLIWMCLFAGHVYRLRQ---RMRQ 187

Query: 367 LKRALLFSLNLLQERIGRLNRDAQTDPLTGLGNRRSL----EISLSLLEAEKREFAAIAL 422
            + AL    + L+  + +L   A TD LTGL NRR      E  LS L  +  +F    +
Sbjct: 188 RRFALQAHQDTLRGMMRQLEDLASTDELTGLYNRRRFLRIAEGELSRLR-KGHQFGLALI 246

Query: 423 DIDHFKRINDSHGHDVGDQVLRQLAELMRRCCREGDLLCRTGGEEFLILLPGATLNVAAA 482
           D+DHFKR+ND HGH  GD+VL+  A + R C R+ D+L R GGEEF++LLP       +A
Sbjct: 247 DLDHFKRVNDIHGHAAGDRVLQTFASVARSCLRDADVLARYGGEEFVLLLPDTDAEQFSA 306

Query: 483 VAERLRVTVQEMPVESV----GAVTISLGVTHWDGETHGEPM-SALGEADRALYRAKQEG 537
             ERLR    +   E V    G +++S+G+T  +    G+ + +AL  AD ALYRAK+ G
Sbjct: 307 CCERLREAFSKAEPEEVDIAAGHLSLSIGLTLVNA---GDDLDAALQRADEALYRAKRAG 363

Query: 538 RNR 540
           RNR
Sbjct: 364 RNR 366