Pairwise Alignments

Query, 544 a.a., GGDEF family protein from Pseudomonas putida KT2440

Subject, 339 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

 Score =  121 bits (304), Expect = 4e-32
 Identities = 67/179 (37%), Positives = 109/179 (60%), Gaps = 10/179 (5%)

Query: 370 ALLFSLNLLQERIGRLNRDAQTDPLTGLGNRRSLEISLSLLEAEKREFAAIALDIDHFKR 429
           A    ++ L+E++ ++ +DA  D L+GL NRR+ +  +  L    ++ + I LDIDHFK 
Sbjct: 161 AATLEISRLKEQLAKVQKDALFDSLSGLYNRRAFDGDMFTLIHAGQQVSLIMLDIDHFKA 220

Query: 430 INDSHGHDVGDQVLRQLAELMRRCCREGDLLCRTGGEEFLILLPGATLNVAAAVAERLRV 489
           +ND++GH  GDQ++R +A+ ++  CR+G    R GGEEF ++ P  +L +A   AE +R 
Sbjct: 221 LNDNYGHLFGDQIIRAIAKRLQSLCRDGVTAYRYGGEEFALIAPHKSLRIARQFAESVRR 280

Query: 490 TVQEMPV------ESVGAVTISLGVTHWDGETHGEPM-SALGEADRALYRAKQEGRNRV 541
           +++++ V      +SVG++T S GV     +  G+ + S +G AD  LY AK  GRNRV
Sbjct: 281 SIEKLTVKDRRSGQSVGSITASFGVVE---KIEGDSLESLIGRADGLLYEAKNLGRNRV 336