Pairwise Alignments

Query, 404 a.a., cobalt-zinc-cadmium resistance protein from Pseudomonas putida KT2440

Subject, 361 a.a., RND family efflux transporter MFP subunit (RefSeq) from Shewanella loihica PV-4

 Score = 80.5 bits (197), Expect = 7e-20
 Identities = 79/287 (27%), Positives = 130/287 (45%), Gaps = 31/287 (10%)

Query: 111 VVPRVPGVVEAVQAELGQAVKRGQVLAVIASQQ----ISDLRSEQQAAQRRLELARL--- 163
           V P+V  +V  +    GQ V +GQ+L  +  ++    ++  R + +  +R  ELAR+   
Sbjct: 66  VTPKVTDMVTEINFNDGQMVDKGQLLVRLQDREQIARVTVARVKMKDHER--ELARISSL 123

Query: 164 -TFQREQQLWQERISAEQDYLQARQALQEAEIALANARQKVAAVGPAGAGNRYELRAPFD 222
            T Q    L ++R+    D   A+  L +AE +L + R                + APF 
Sbjct: 124 VTSQTVAALERDRLQTLID--TAKAELDQAESSLKDRR----------------ILAPFS 165

Query: 223 AVVVEKHLTVGEVVDETSNAFTLSDLSRVWATFAVAPRDLGKVVTGREVTVSAPDLGAQV 282
             +  + ++ G +V   +   TL D+S +   F+V  R L  +  G+ V  SA     ++
Sbjct: 166 GRLGLRQVSQGSLVTPGTVITTLDDISTIKLDFSVPERFLQSLAIGKSVEASAVAFEGEL 225

Query: 283 L-GKVNYVGSLLGEQNRAATVRATLANPNGAWRPGLFVNVAVSVDRFDAAVAVPESALQT 341
             GKV  V S +    RA TVRA + N      PG+ + V + + +   A+ +PE+A+  
Sbjct: 226 FTGKVVSVDSRINPTTRAVTVRAEIPNKGMRLLPGMLMKVKL-IKQSREALIIPEAAIIP 284

Query: 342 WEAQTVVFARTEEG-FEARPVKTGRRDAGQVEITSGLAAGTQVAAAG 387
            +    V+   +E   E R V+ G R  G VEI  G+  G QV   G
Sbjct: 285 IQKDHFVYLVNDENVVERRQVQLGLRKRGWVEIVGGVDVGEQVMVRG 331