Pairwise Alignments

Query, 786 a.a., DNA polymerase II from Pseudomonas putida KT2440

Subject, 787 a.a., DNA polymerase II (EC 2.7.7.7) from Pseudomonas fluorescens FW300-N2E2

 Score = 1209 bits (3127), Expect = 0.0
 Identities = 598/787 (75%), Positives = 663/787 (84%), Gaps = 1/787 (0%)

Query: 1   MELQQGFVLTRHWHDTPEGTCVEFWLATDAGPRLLRLAAQESVAFIPQAQAEHARVLLAN 60
           ++LQQGFVLTRHW DTP GT VEFWLATDAGPR +RL  Q SVAF+PQ Q      LL  
Sbjct: 1   VDLQQGFVLTRHWRDTPAGTEVEFWLATDAGPRRVRLPVQTSVAFVPQIQRGQLEALLQG 60

Query: 61  ETGTKLKPLRLKDFEHRPMLGLYTRQHRQLMQLEQRLRTAGIDVFEADIRPPERYLMERF 120
           E   +L+PL L DFEHRP+LGLY +QH QLM+L+  LR AG++VFEADIRPPERYLMERF
Sbjct: 61  EKEVELRPLDLLDFEHRPVLGLYCQQHAQLMRLDTTLRRAGVEVFEADIRPPERYLMERF 120

Query: 121 ITAPVQFTGQPDAQGVYRDAQLKPQPGYRPALRLVSLDIETSERGELYSIALEGCGQRQV 180
           ITAPV F G P A G+  D Q+KP P YRP LRLVSLDIET+ +GELYS+ALEGCG+RQV
Sbjct: 121 ITAPVWFGGTPTADGLLVDVQMKPAPEYRPPLRLVSLDIETTAQGELYSVALEGCGERQV 180

Query: 181 YMLGPANGDASGLDFDLEYCADRAALITRLNQWMARHDPDAIIGWNLVQFDLRLLHEHAK 240
           YMLGPANGD +G+DF LEYC  R  L+ +LN W AR DPDAIIGWNLVQFDLR+LHEHA+
Sbjct: 181 YMLGPANGDDTGVDFQLEYCESRTLLLKKLNDWFARFDPDAIIGWNLVQFDLRVLHEHAR 240

Query: 241 SLQVPLALGRNGAVMTLRSH-AGGGHVFADAPGRLLIDGIEALRSATWSFASFSLENVAQ 299
            L VPL LGR G  M  R H A   H FA A GRL+IDGIE+LRSATWSF SFSLENVAQ
Sbjct: 241 RLAVPLRLGRGGEEMQWREHGARNNHFFASAAGRLIIDGIESLRSATWSFPSFSLENVAQ 300

Query: 300 TLLGEGKAIDTPYQRMDEINRRFAEDKPALARYNLKDCELVTRIFAHTRLLDFLLERASV 359
           TLLGEGK+ID PYQRMDEINR FAEDKPALARYNLKDCELVTRIFA T LL FLLERASV
Sbjct: 301 TLLGEGKSIDNPYQRMDEINRMFAEDKPALARYNLKDCELVTRIFAKTELLKFLLERASV 360

Query: 360 TGLAVDRSGGSVAAFCHLYIPQMHRLGFVAPSLGSRPDEASPGGFVMDSRPGLYDSVLVL 419
           TGL  DRSGGSVAAF HLY+P MHR GFVAP+LG RP EASPGGFVMDS+PGLY+SVLVL
Sbjct: 361 TGLPADRSGGSVAAFTHLYMPLMHRQGFVAPNLGQRPPEASPGGFVMDSQPGLYESVLVL 420

Query: 420 DYKSLYPSIIRTFLIDPVGLIEGLRQPDDAHSVEGFRGGRFSRTQHCLPAIVERVWQGRE 479
           DYKSLYPSIIRTFLIDPVGLIEGLR P D  SV GFRG RFSRT+HCLPAIV RV +GRE
Sbjct: 421 DYKSLYPSIIRTFLIDPVGLIEGLRHPADQESVPGFRGARFSRTRHCLPAIVARVSEGRE 480

Query: 480 AAKREGNAPLSQALKIIMNAFYGVLGSSGCRFFDPRLASSITMRGHQIMRQTRSLIEACG 539
            AKRE NAPLSQALKIIMNAFYGVLGSSGCRFFDPRLASSIT+RGHQIM++TR LIEA G
Sbjct: 481 TAKREHNAPLSQALKIIMNAFYGVLGSSGCRFFDPRLASSITLRGHQIMQRTRQLIEAQG 540

Query: 540 YDVIYGDTDSTFVWLKGAHAEEDAARIGRELVAKVNQWWQAHLHETMNLHSALELQFEVH 599
           + VIYGDTDSTFVWL+ AH +E+AARIGRELVA VNQWW+  + +   L SALELQFE H
Sbjct: 541 HVVIYGDTDSTFVWLRRAHGQEEAARIGRELVAHVNQWWREQVRDEFGLESALELQFETH 600

Query: 600 YRRFLMPTIRGTDEGSKKRYAGLVQRADGAEEMVYKGLESVRTDWSPLARQFQQELYGRV 659
           ++RFLMPTIRG +EGSKKRYAGLV RADG++E+VYKGLE+VRTDWSPLARQFQQELYGR+
Sbjct: 601 FKRFLMPTIRGAEEGSKKRYAGLVTRADGSDEIVYKGLETVRTDWSPLARQFQQELYGRI 660

Query: 660 FRSEPYRDYVREYVRRTLAGEQDELLVYRKRLRRPLADYQRNVPPHVRAARLADDYNKRL 719
           F  +PY+DYVR+YV++TLAG  D+ LVYRKRLRRPL DY+RNVPPHVRAARLAD++N+R 
Sbjct: 661 FHRQPYQDYVRDYVQQTLAGAFDDRLVYRKRLRRPLEDYERNVPPHVRAARLADEFNQRQ 720

Query: 720 QRPLQYQRGGWISYVITTAGPEPLENLQAPIDYDHYISRQLLPVADAILPFVGDDFARLT 779
            RP QYQ GGWISYVIT AGPEPLE   APIDYDHY+S+QL PVADAILPFV DDF+ L 
Sbjct: 721 GRPRQYQNGGWISYVITVAGPEPLEIRSAPIDYDHYVSKQLQPVADAILPFVDDDFSTLV 780

Query: 780 DHQLLLF 786
             Q+ LF
Sbjct: 781 GGQMGLF 787