Pairwise Alignments

Query, 281 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 270 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  141 bits (356), Expect = 1e-38
 Identities = 83/249 (33%), Positives = 132/249 (53%), Gaps = 3/249 (1%)

Query: 20  VEMLHARYYQQRFAPHVHEGYVFTVIESGAQRFWHRGSEHLAPVGSMVLINPDELHTGAT 79
           + ++ A Y Q  F  H H      +I  G QRF+H+G+ H    G +VL++PDELH G  
Sbjct: 17  ISLIEADYRQFAFERHYHLDIHIGLITQGVQRFYHQGAWHQVGQGGVVLMSPDELHDGHA 76

Query: 80  AHEAGWRYRGFYPEHERVTGVLDELELGRHGMPSFKDSVIHDPALALAFSQLHQL-SEAS 138
               G++ + F  E E +   L+  ++ +  +  F+  ++ DP L  +  QLH L  + +
Sbjct: 77  HSNTGYQVQVFSIEPEWLQQTLEANQIEQ--VIGFEQLIVQDPTLFHSLQQLHHLLRQDN 134

Query: 139 ASALQQQTAWRQAVLALVQRHGQCAEPSAPGHEPLAVARARELLESQLADPPSLEALAAA 198
            S L +     Q    L++R+    +P+        +A  +E + SQL  P  LE LA  
Sbjct: 135 LSQLAKDCLPYQGFAPLLERYSYLKQPTVKPLGQHNLALLKEWVLSQLDQPIRLEQLAQL 194

Query: 199 VNLSPFHFARVFRQATGLPPHAWLKQRRLARAREMLKHGLAASQVAFDLGFADQSHLSRQ 258
             LSP  F R F+  TGL P+AWL++ RL +A ++L+ G   + VA+ +GF DQ+H S+ 
Sbjct: 195 CQLSPTQFQRHFKAQTGLTPYAWLRRLRLEQAMKLLQSGKPGTDVAYQVGFYDQAHFSKA 254

Query: 259 FKQAYGVTP 267
           FK  YG++P
Sbjct: 255 FKATYGLSP 263