Pairwise Alignments

Query, 1235 a.a., cobalamin-dependent methionine synthase from Pseudomonas putida KT2440

Subject, 1257 a.a., B12-dependent methionine synthase from Sinorhizobium meliloti 1021

 Score = 1497 bits (3875), Expect = 0.0
 Identities = 774/1240 (62%), Positives = 923/1240 (74%), Gaps = 17/1240 (1%)

Query: 3    DRSARLQALQNALKERILILDGGMGTMIQSYRLEEHDYRGTRFADWPSDVKGNNDLLLLS 62
            D S   + L  A  ERILI+DG MGT IQ     E  +RG RF       +GNNDLL L+
Sbjct: 16   DGSEVFRQLAQAAAERILIMDGAMGTEIQQLGFVEDHFRGERFGGCACHQQGNNDLLTLT 75

Query: 63   RPDVIAAIEKAYLDAGADILETNTFNATQISQADYGMESLVYELNVEGARIARQVADAKT 122
            +P  I  I   Y  AGADILETNTF++T+I+QADYGME +VY+LN +GAR+AR+ A  K 
Sbjct: 76   QPKAIEDIHYHYAIAGADILETNTFSSTRIAQADYGMEDMVYDLNRDGARLARRAA--KR 133

Query: 123  LETPD-KPRFVAGVLGPTSRTCSISPDVNDPGFRNVTFDELVENYIEATRGLIEGGADLI 181
             E  D + RFVAG LGPT+RT SISPDVN+PG+R V+FD+L   Y E  RGLI+GGAD+I
Sbjct: 134  AEAEDGRRRFVAGALGPTNRTASISPDVNNPGYRAVSFDDLRLAYAEQVRGLIDGGADII 193

Query: 182  LIETIFDTLNAKAAIFAVQQVFEDDNVELPIMISGTITDASGRTLSGQTTEAFWNSVRHA 241
            LIETIFDTLNAKAAIFA Q+VF +  V LP+MISGTITD SGRTLSGQT  AFW SVRHA
Sbjct: 194  LIETIFDTLNAKAAIFATQEVFAEKGVRLPVMISGTITDLSGRTLSGQTPTAFWYSVRHA 253

Query: 242  KPISVGLNCALGAKDLRPYLEELATKADTHVSAHPNAGLPNAFGEYDETPAEMAAVVEEF 301
             P ++GLNCALGA  +R +++EL+  ADT V A+PNAGLPN FG YDE+P +MAA VE F
Sbjct: 254  DPFTIGLNCALGANAMRAHIDELSAVADTLVCAYPNAGLPNEFGRYDESPEQMAAQVEGF 313

Query: 302  AASGFLNIIGGCCGTTPGHIQAIAEAVAKYKPREIPEIAKACRLSGLEPFTIDRQSLFVN 361
            A  G +NI+GGCCG+TP HI+AIAEAVAKY PR +PEI +  RLSGLEPFT+  +  FVN
Sbjct: 314  ARDGLVNIVGGCCGSTPAHIRAIAEAVAKYPPRRVPEIDRRMRLSGLEPFTLTDEIPFVN 373

Query: 362  VGERTNITGSAKFARLIREENYTEALEVALQQVEAGAQVIDINMDEGMLDSQAAMVRFLN 421
            VGERTN+TGSAKF +LI   +Y  AL+VA  QV  GAQ+ID+NMDEG++DS+  MV FLN
Sbjct: 374  VGERTNVTGSAKFRKLITAGDYAAALDVARDQVANGAQIIDVNMDEGLIDSKQVMVEFLN 433

Query: 422  LIAGEPDISRVPIMIDSSKWEVIEAGLKCIQGKGIVNSISMKEGVEQFKHHARLCKRYGA 481
            L+A EPDI+RVP+MIDSSKWEVIEAGLKC+QGK +VNSIS+KEG   F HHARL + YGA
Sbjct: 434  LVASEPDIARVPVMIDSSKWEVIEAGLKCVQGKALVNSISLKEGEAAFLHHARLVRAYGA 493

Query: 482  AVVVMAFDEVGQADTAARKKEICQRSYDILVNEVGFPPEDIIFDPNIFAVATGIEEHNNY 541
            AVVVMAFDE GQADT  RK EIC+R+Y +L  EVGFPPEDIIFDPNIFAVATGIEEHNNY
Sbjct: 494  AVVVMAFDEKGQADTKTRKVEICRRAYRLLTEEVGFPPEDIIFDPNIFAVATGIEEHNNY 553

Query: 542  AVDFIEACAYIRDHLPHALSSGGVSNVSFSFRGNNPVREAIHSVFLYHAIQNGLTMGIVN 601
             VDFIEA   I   LPH   SGGVSN+SFSFRGN PVREA+H++FLYHAIQ G+ MGIVN
Sbjct: 554  GVDFIEATHEIIAALPHVHVSGGVSNLSFSFRGNEPVREAMHAIFLYHAIQAGMDMGIVN 613

Query: 602  AGQLEIYDEIPAQLREKVEDVVLNRTPHGTDALLAIADDYKGGGATKEVENE-EWRSLPV 660
            AGQL +YD I  +LRE  EDVVLNR    T+ LL IA+ Y+G G ++  E +  WR  PV
Sbjct: 614  AGQLAVYDAIDPELRETCEDVVLNRRADSTERLLEIAERYRGKGGSQGKEKDLAWREWPV 673

Query: 661  EKRLEHALVKGITAFIVEDTEACRQQCARPIEVIEGPLMNGMNVVGDLFGAGKMFLPQVV 720
            EKRLEHALV GIT FI  DTE  R    RP+ VIEGPLM GMNVVGDLFG+GKMFLPQVV
Sbjct: 674  EKRLEHALVNGITEFIEADTEEARLAAERPLHVIEGPLMAGMNVVGDLFGSGKMFLPQVV 733

Query: 721  KSARVMKQAVAHLIPFIEAEK-----GDKPEAKGKILMATVKGDVHDIGKNIVGVVLGCN 775
            KSARVMKQAVA L+P +E EK     G+  E+ GKILMATVKGDVHDIGKNIVGVVL CN
Sbjct: 734  KSARVMKQAVAVLLPHMEEEKRANGGGEARESAGKILMATVKGDVHDIGKNIVGVVLACN 793

Query: 776  GYDIVDLGVMVPAEKILQTAREQKCDIIGLSGLITPSLDEMVHVAREMQRQGFELPLMIG 835
             Y+I+DLGVMVP+ KIL+ AREQK DI+GLSGLITPSLDEM HVA E++R+GF++PL+IG
Sbjct: 794  NYEIIDLGVMVPSAKILEVAREQKVDIVGLSGLITPSLDEMAHVASELEREGFDVPLLIG 853

Query: 836  GATTSKAHTAVKIEPKYSNDAVIYVTDASRAVGVATQLLSKELKPGFVEKTRLEYVDVRE 895
            GATTS+ HTAVKI P+YS    +YVTDASRAVGV + LLS E++  + +  R EY+ V +
Sbjct: 854  GATTSRVHTAVKINPRYSLGQTVYVTDASRAVGVVSSLLSPEVRDSYKKTVRAEYLKVAD 913

Query: 896  RTANRSARTERLSYAQAIAAKPQYDWAGYQPTAPSFTGVKVLEDIDLRTLAEYIDWTPFF 955
              A   A   RL  +QA A   + DW  +QP  PSF G +V E  DL  LA YIDWTPFF
Sbjct: 914  AHARNEAEKRRLPLSQARANAFRIDWDAHQPKVPSFLGTRVFEGWDLAELARYIDWTPFF 973

Query: 956  ISWDLAGKFPRILTDEVVGEAATALYKDAREMLDKLIDEKLISARAVFGFWPANQVDDDD 1015
             +W+L G FP+IL DE  G AA  L++DA+ M++K++ E   + +AV GFWPA  +  DD
Sbjct: 974  QTWELKGVFPKILDDERQGAAARQLFEDAQAMVEKIVAEAWFAPKAVIGFWPAASM-GDD 1032

Query: 1016 IEVYGEDGQ--ALATLHHLRQQTIKPDGKPNWSLADFVAPKDSGVTDYVGGFITTAGIGA 1073
            + ++ ++ +   LAT   LRQQ +K DG+PN +LADFVAP  SG  DYVGGF+ TAGI  
Sbjct: 1033 VRLFADEVREAELATFFTLRQQMVKRDGRPNVALADFVAPAASGKRDYVGGFVVTAGIEE 1092

Query: 1074 EEVAKAYQDKGDDYSSIMVKALADRLAEACAEWLHEQVRKEHWGYARDEHLDNEALIKEQ 1133
              +A+ ++   DDYSSIMVKALADR AEA AE +HE VRKE WGYA DE    + LI E 
Sbjct: 1093 VAIAERFERANDDYSSIMVKALADRFAEAFAERMHEYVRKELWGYAPDEAFTPQELIAEP 1152

Query: 1134 YSGIRPAPGYPACPDHTEKETLFRLLDGTAIGETGPSGVYLTEHFAMFPAAAVSGWYFAH 1193
            Y+GIRPAPGYPA PDHTEKETLFRLLD  A       GV LTE +AM+P ++VSG Y  H
Sbjct: 1153 YAGIRPAPGYPAQPDHTEKETLFRLLDAEA-----AIGVRLTESYAMWPGSSVSGLYVGH 1207

Query: 1194 PQAKYFAVGKVDKDQIERYSARKGQDISVSERWLAPNLGY 1233
            P + YF V K+++DQ+E Y+ RK   +   ERWL+P L Y
Sbjct: 1208 PDSYYFGVAKIERDQVEDYADRKRMSVREVERWLSPILNY 1247