Pairwise Alignments

Query, 1235 a.a., cobalamin-dependent methionine synthase from Pseudomonas putida KT2440

Subject, 1244 a.a., 5-methyltetrahydrofolate--homocysteine methyltransferase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 1533 bits (3968), Expect = 0.0
 Identities = 780/1243 (62%), Positives = 961/1243 (77%), Gaps = 22/1243 (1%)

Query: 5    SARLQALQNALKERILILDGGMGTMIQSYRLEEHDYRGTRFADWPSDVKGNNDLLLLSRP 64
            S  L  ++N L  RILILDG MGTMIQ Y+LEE DYRG RF DW +DVKGNNDLL+L++P
Sbjct: 9    SHTLADIRNQLSTRILILDGAMGTMIQGYKLEEADYRGERFKDWHTDVKGNNDLLVLTQP 68

Query: 65   DVIAAIEKAYLDAGADILETNTFNATQISQADYGMESLVYELNVEGARIARQVADAKTLE 124
             +I  I   YL AGADI+ETNTFNAT I+ ADY M+SL  E+N EGAR+AR+  DA    
Sbjct: 69   HIIKQIHTDYLLAGADIIETNTFNATTIAMADYDMQSLSAEINREGARLAREACDAIEQA 128

Query: 125  TPDKPRFVAGVLGPTSRTCSISPDVNDPGFRNVTFDELVENYIEATRGLIEGGADLILIE 184
            T  KPR+VAGVLGPT+RTCSISPDVNDPGFRN+ FDELV  Y E+TR LIEGGAD+I++E
Sbjct: 129  T-GKPRYVAGVLGPTNRTCSISPDVNDPGFRNIHFDELVTAYCESTRALIEGGADIIMVE 187

Query: 185  TIFDTLNAKAAIFAVQQVFED-----DNVELPIMISGTITDASGRTLSGQTTEAFWNSVR 239
            TIFDTLNAKAA+FA++ VF++         LP+MISGTITDASGRTL+GQTTEAF+NS+R
Sbjct: 188  TIFDTLNAKAALFAIETVFDELFGANSPARLPVMISGTITDASGRTLTGQTTEAFYNSLR 247

Query: 240  HAKPISVGLNCALGAKDLRPYLEELATKADTHVSAHPNAGLPNAFGEYDETPAEMAAVVE 299
            H KP+S+GLNCALG K+LRPY+EEL+  A+ +VSAHPNAGLPN FG YDETP +MA V++
Sbjct: 248  HIKPLSIGLNCALGPKELRPYVEELSRIAECYVSAHPNAGLPNEFGGYDETPEDMAKVIQ 307

Query: 300  EFAASGFLNIIGGCCGTTPGHIQAIAEAVAKYKPREIPEIAKACRLSGLEPFTIDRQSLF 359
            E+A  G LNIIGGCCG+TP HI+ I EAV ++ PR +PEI  ACRL+GLEP TID Q+LF
Sbjct: 308  EWAREGMLNIIGGCCGSTPEHIKVIREAVEQFAPRVLPEIPVACRLAGLEPLTIDAQTLF 367

Query: 360  VNVGERTNITGSAKFARLIREENYTEALEVALQQVEAGAQVIDINMDEGMLDSQAAMVRF 419
            VNVGERTN+TGSAKF +LI+E  + +AL+VA +QVE+GAQ+IDINMDEGMLD    M +F
Sbjct: 368  VNVGERTNVTGSAKFLKLIKEGKFEQALDVAREQVESGAQIIDINMDEGMLDGVEIMHKF 427

Query: 420  LNLIAGEPDISRVPIMIDSSKWEVIEAGLKCIQGKGIVNSISMKEGVEQFKHHARLCKRY 479
            LNLIA EPDISRVPIMIDSSKWEVIEAGLKCIQGKGIVNSIS+KEG E+F   A L KRY
Sbjct: 428  LNLIASEPDISRVPIMIDSSKWEVIEAGLKCIQGKGIVNSISLKEGEEKFIEQATLVKRY 487

Query: 480  GAAVVVMAFDEVGQADTAARKKEICQRSYDILVNEVGFPPEDIIFDPNIFAVATGIEEHN 539
            GAA ++MAFDE GQADT ARK EIC R+Y +LV++VGFPPEDIIFDPNIFA+ATGI+EH+
Sbjct: 488  GAAAIIMAFDEQGQADTKARKVEICTRAYRVLVDKVGFPPEDIIFDPNIFAIATGIDEHD 547

Query: 540  NYAVDFIEACAYIRDHLPHALSSGGVSNVSFSFRGNNPVREAIHSVFLYHAIQNGLTMGI 599
            NYAVDFI+A   I+  LPHA+ SGGVSNVSFSFRGNNPVREAIH+VFLYHAI+ G+ MGI
Sbjct: 548  NYAVDFIDAIKEIKATLPHAMISGGVSNVSFSFRGNNPVREAIHAVFLYHAIKVGMDMGI 607

Query: 600  VNAGQLEIYDEIPAQLREKVEDVVLN-----RTPHGTDALLAIADDYKG-GGATKEVENE 653
            VNAGQL I+D+I  +L+ +VE+VVLN        + T+ LL IA+ ++G G ++ + E+ 
Sbjct: 608  VNAGQLAIFDDIDPELKVRVENVVLNLPCPVEGSNNTEQLLEIAEKFRGDGSSSAKKEDL 667

Query: 654  EWRSLPVEKRLEHALVKGITAFIVEDTEACRQQCARPIEVIEGPLMNGMNVVGDLFGAGK 713
            EWRS PV +RL HALVKGIT FI EDTEA RQ  +RP++VIEGPLM+GMN+VGDLFG+GK
Sbjct: 668  EWRSWPVNQRLAHALVKGITEFIDEDTEAARQAASRPLDVIEGPLMDGMNIVGDLFGSGK 727

Query: 714  MFLPQVVKSARVMKQAVAHLIPFIEAEKGDKPEAKGKILMATVKGDVHDIGKNIVGVVLG 773
            MFLPQVVKSARVMK+AVA+L PFIE EK    ++ GKILM TVK DVHDIGKNIVGVVL 
Sbjct: 728  MFLPQVVKSARVMKKAVAYLNPFIEKEK-VAGQSNGKILMVTVKSDVHDIGKNIVGVVLA 786

Query: 774  CNGYDIVDLGVMVPAEKILQTAREQKCDIIGLSGLITPSLDEMVHVAREMQRQGFELPLM 833
            CNG+++ DLGVMV  E+IL+  +E   DIIG+SGLITPSLDEMVH  +   R+G  +P +
Sbjct: 787  CNGFEVFDLGVMVSVERILEAVKEHNIDIIGMSGLITPSLDEMVHNVKTFHREGLTIPAI 846

Query: 834  IGGATTSKAHTAVKIEPKYSNDAVIYVTDASRAVGVATQLLSKELKPGFVEKTRLEYVDV 893
            IGGAT SK HTAVKI P Y + A IY+ DASRAV + ++L++ E +   +++T  EY D+
Sbjct: 847  IGGATCSKIHTAVKIAPHYPHGA-IYIADASRAVPMVSKLVNNETRQATIDETYAEYDDM 905

Query: 894  RERTANRSARTERLSYAQAIAAKPQYDWAGYQPTAPSFTGVKVLEDIDLRTLAEYIDWTP 953
            R +  +++ R E +S   A   + Q+DWA Y P  P+  G +V +D  L  L + IDWTP
Sbjct: 906  RTKRLSQAKRKEIVSLEAARENRCQHDWANYSPFKPNVLGRQVFDDYPLTDLVDRIDWTP 965

Query: 954  FFISWDLAGKFPRILTDEVVGEAATALYKDAREMLDKLIDEKLISARAVFGFWPANQVDD 1013
            FF +W+L G +P IL+D+VVG  A  L+ D + ML K+I+EK ++A+ V G +PAN V  
Sbjct: 966  FFRAWELHGHYPEILSDKVVGVEAQKLFSDGKAMLKKIIEEKWLTAKGVIGLFPANTVGF 1025

Query: 1014 DDIEVYGED--GQALATLHHLRQQTIKPDGKPNWSLADFVAPKDSGVTDYVGGFITTAGI 1071
            DDIE+Y ++   +   T HHLR Q ++  G  N+ LADFVAPKDSGV DY+GGF  TAG 
Sbjct: 1026 DDIELYTDETRTEVELTTHHLRMQ-LERVGNDNFCLADFVAPKDSGVADYMGGFAVTAGH 1084

Query: 1072 GAEEVAKAYQDKGDDYSSIMVKALADRLAEACAEWLHEQVRKEHWGYARDEHLDNEALIK 1131
            G +E    ++   DDY++IM+K LADRLAEA AE +HE+VRKE WGYA DE LDNEALI+
Sbjct: 1085 GIDEHVARFEANHDDYNAIMLKCLADRLAEAFAERMHERVRKEFWGYAADEQLDNEALIR 1144

Query: 1132 EQYSGIRPAPGYPACPDHTEKETLFRLLDGTAIGETGPSGVYLTEHFAMFPAAAVSGWYF 1191
            E+Y GIRPAPGYPACPDHTEK  L+ LL      ET    + +TE +AMFP AAVSGWYF
Sbjct: 1145 EKYKGIRPAPGYPACPDHTEKGLLWELLKP---NET--IDLNITESYAMFPTAAVSGWYF 1199

Query: 1192 AHPQAKYFAVGKVDKDQIERYSARKGQDISVSERWLAPNLGYD 1234
            AHP+++YF V  + +DQ+E Y+ RKG  ++ +E+WLAP L YD
Sbjct: 1200 AHPKSRYFGVSNIGRDQVEDYAKRKGMTVAETEKWLAPVLDYD 1242