Pairwise Alignments

Query, 358 a.a., putative Periplasmic sugar-binding protein from Pseudomonas putida KT2440

Subject, 296 a.a., D-ribose ABC transporter substrate-binding protein from Klebsiella michiganensis M5al

 Score = 50.1 bits (118), Expect = 8e-11
 Identities = 61/271 (22%), Positives = 115/271 (42%), Gaps = 21/271 (7%)

Query: 2   LKALCQSLCLVLPLVANAQPASVVFLNPGLSTETFWTSYTRFMQAAADELGMTLQVQYSE 61
           L  L  ++ L   + ANA     + L        F+ S     Q  AD+LG  L V  S+
Sbjct: 6   LATLVSAVALSATVSANAMAKDTIALVISTLNNPFFVSLKEGAQKEADKLGYNLVVLDSQ 65

Query: 62  RRADLTLTQARAILSAPQRPDYLVLVNEQYVAPEILRLSRGTGVKLLLVNNGLTASQRLS 121
                 L   + +     R   L+L+N           S   G  + L N        ++
Sbjct: 66  NNPAKELANVQDLTV---RGTKLLLINPTD--------SDAVGNAVKLANQAKIPV--IT 112

Query: 122 IEGQPDKYAEPLGTLMSNDEQAGFQMLHLMLAQLPRDAGPVDLVAFAGVKTTPASQLRVE 181
           ++ Q  K  + +  + S++   G      +  ++  +A  ++L   AG   T A++ R E
Sbjct: 113 LDRQASK-GDVVSHIASDNVLGGKMAGDYIAKKVGENAKIIELQGIAG---TSAARERGE 168

Query: 182 GMRRALADFPQVRLRQVVYGGWNRQRAYEQAKQLLERYPATRLVWSANDQMAFGAMQAFE 241
           G ++A+A   +  +       ++R +     + LL  +P  + V++ ND+MA GA++A +
Sbjct: 169 GFQQAVAAH-KFNVLASQPADFDRTKGLNVMQNLLTAHPDVQAVFAQNDEMALGALRALQ 227

Query: 242 EAGHTPGRDVLFAAVNSSPEALRARIDGRLS 272
            AG +   DV+    + +P+  +A   G+L+
Sbjct: 228 TAGKS---DVMVVGFDGTPDGEKAVNSGKLA 255