Pairwise Alignments

Query, 358 a.a., putative Periplasmic sugar-binding protein from Pseudomonas putida KT2440

Subject, 921 a.a., two-component system sensor histidine kinase/response regulator, hybrid ('one component system') (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 53.9 bits (128), Expect = 2e-11
 Identities = 42/177 (23%), Positives = 85/177 (48%), Gaps = 18/177 (10%)

Query: 84  LVLVNEQYVAPEILRLSRGTGVKLLLVNNGLTASQRLSIEGQPDKYAEPLGTLMSNDEQA 143
           ++  NE      I+  +   G+ ++LV+  + +          DKY   +G   +++ + 
Sbjct: 93  IISANEAAPMTPIVEEAYQKGIPVILVDRKILS----------DKYTAYIG---ADNYEI 139

Query: 144 GFQMLHLMLAQLPRDAGPVDLVAFAGVKTTPASQLRVEGMRRALADFPQVRLRQVVYGGW 203
           G  + + + + L      V+L   +G  +TPA + R +G   A++ FP ++L       W
Sbjct: 140 GRSVGNYIASSLKGKGNIVELTGLSG--STPAME-RHQGFMAAISKFPDIKLIDKADAAW 196

Query: 204 NRQRAYEQAKQLLERYPATRLVWSANDQMAFGAMQAFEEAGHTPGRDVLFAAVNSSP 260
            R  A  +   +L R+P    V++ ND++A GA QA + AG    ++++F  +++ P
Sbjct: 197 ERGPAEIEMDSMLRRHPKIDAVYAHNDRIAPGAYQAAKMAGRE--KEMIFVGIDALP 251