Pairwise Alignments

Query, 395 a.a., putative inner membrane transport protein from Pseudomonas putida KT2440

Subject, 388 a.a., arabinose transporter permease from Pseudomonas fluorescens FW300-N2E3

 Score =  320 bits (819), Expect = 6e-92
 Identities = 171/366 (46%), Positives = 237/366 (64%)

Query: 12  LFALAIGAFGIGTTEFTPMGLLPVIAQGVEVSIPSAGMLITAYAIGVMVGAPIMTLLFSR 71
           L  LA+ AF IGTTEF  MGLLP +A  + VSIP AG L+T YA+GV +GAP M L  +R
Sbjct: 5   LLILALSAFAIGTTEFVIMGLLPDVAADLGVSIPGAGWLVTGYALGVAIGAPFMALATAR 64

Query: 72  FGKRAALMALMAIFTLGNLLSSLSPDYYTLLASRLVTSLNHGAFFGLGAVVAASVVPKEK 131
             ++AAL+ALM IF +GNLL +L+ DY  L+ +R+VT+L HGAFFG+G+VVAA +VP  K
Sbjct: 65  LPRKAALVALMGIFIVGNLLCALASDYQVLMFARVVTALCHGAFFGIGSVVAAGLVPANK 124

Query: 132 QASAVATMFMGLTIANIGGVPAATWIGQQIGWRMAFAGTAVLGLLAMAALWYALPKGERG 191
           +ASAVA MF GLT+AN+ GVP  T +GQ+ GWR  F    V+G++A+  L   LP     
Sbjct: 125 RASAVALMFTGLTLANVLGVPLGTALGQEAGWRSTFWAVTVIGVIALIGLIRFLPAKRDE 184

Query: 192 SVPHVRKELAVIARPSVLLAMATTVLGAGAMFTLYTYVAPVLAELTGASDGFVTLGLVLI 251
               +R EL+ +    + L+++ T L A ++FTL+TYVAP+L E+TG S   VT  L+LI
Sbjct: 185 EKLDMRAELSALKGAGIWLSLSMTALFAASVFTLFTYVAPLLGEVTGVSPRGVTWTLMLI 244

Query: 252 GVGFTLGNSLGGRLADWSLDGAAKIFLAVLALIMLAMPLVLGSHIGAAIALLVWGMFTFA 311
           G+G T+GN +GG+LAD  +          +A++   +     + I   I L +W    FA
Sbjct: 245 GLGLTVGNIIGGKLADKGMAATLIGVFISMAVVSTVLTWTSVAVIPTEITLFLWATACFA 304

Query: 312 VVPPLQMRVMTAAIEAPGLASSINVGAFNLGNAVGAALGGAVISLNLGYAAVPMAGGVLA 371
            VP LQ+ V+T    AP L S++N+GAFN+GNA+GA +GG+VI+   G  +VP+A   LA
Sbjct: 305 AVPALQVNVVTFGKAAPNLVSTLNIGAFNVGNALGAWVGGSVIAHGFGLTSVPLAAAALA 364

Query: 372 AAGLLL 377
              LL+
Sbjct: 365 ILALLV 370