Pairwise Alignments

Query, 395 a.a., putative inner membrane transport protein from Pseudomonas putida KT2440

Subject, 397 a.a., efflux protein from Sinorhizobium meliloti 1021

 Score =  281 bits (718), Expect = 3e-80
 Identities = 156/389 (40%), Positives = 238/389 (61%), Gaps = 9/389 (2%)

Query: 12  LFALAIGAFGIGTTEFTPMGLLPVIAQGVEVSIPSAGMLITAYAIGVMVGAPIMTLLFSR 71
           +FAL I A+ IGTTEF  +GLLP +A  + +++P AG++++ YA+GV  GAP++T L  R
Sbjct: 5   IFALTIAAYAIGTTEFVIVGLLPTVATDLAITLPLAGLIVSVYALGVTFGAPVLTALTGR 64

Query: 72  FGKRAALMALMAIFTLGNLLSSLSPDYYTLLASRLVTSLNHGAFFGLGAVVAASVVPKEK 131
             ++  L+ LMA+F  GN  ++LSP+Y  LL +R++++  HG FF +G+ +AA +VP+ +
Sbjct: 65  IERKPLLLGLMALFIGGNTAAALSPNYEVLLVARVLSAFAHGVFFSVGSTIAADLVPENR 124

Query: 132 QASAVATMFMGLTIANIGGVPAATWIGQQIGWRMAFAGTAVLGLLAMAALWYALPKGERG 191
           +ASA+A MFMGLT+A + GVP  T+IGQ  GWR  F G + LG++A A +   LP     
Sbjct: 125 RASAIAMMFMGLTVAIVTGVPIGTYIGQVFGWRATFWGVSGLGVVAFAGIATLLPGTLAK 184

Query: 192 SVP-HVRKELAVIARPSVLLAMATTVLGAGAMFTLYTYVAPVLAELTGASDGFVTLGLVL 250
           + P  +  ++ V+    +L+  A T LG G  F  +T++AP+L E+TG S+  V+L LVL
Sbjct: 185 AAPASLLDQVRVLGSGRLLIVFAMTALGYGGTFVAFTFLAPILQEVTGFSERSVSLILVL 244

Query: 251 IGVGFTLGNSLGGRLADWSLDGAAKIFLAVLALIMLAMPLVLGSHIGAAIALLVWGMFTF 310
            GV   +GN  GGR+A+ +   A      + AL+++       S +   + L   G  +F
Sbjct: 245 YGVAIAIGNIAGGRIANTNPVKALIGLFLLQALVLVIFSFTAVSPVLTLVTLAALGFLSF 304

Query: 311 AVVPPLQMRVMTAAIE----APGLASSINVGAFNLGNAVGAALGGAVISLNLGYAAVPMA 366
           A VP LQ+ V+  A+E    A  +AS++N+ AFNLG A+GA LGG V+    G +A P  
Sbjct: 305 ANVPGLQLYVVQLAMEHRPGAVDVASALNIAAFNLGIALGAWLGGMVVDSPFGLSATPWV 364

Query: 367 GGVLAAAGLLL-VWLG---GRHKVAGKTA 391
           G +L +  LLL +W G    R  V+G+ A
Sbjct: 365 GAILVSGALLLTLWSGVLDRRGAVSGEPA 393



 Score = 33.5 bits (75), Expect = 1e-05
 Identities = 35/159 (22%), Positives = 65/159 (40%), Gaps = 13/159 (8%)

Query: 9   GRVLFALAIGAFGIGTTEFTPMGLLPVIAQGVEVSIPSAGMLITAYAIGVMVGAPIMTLL 68
           GR+L   A+ A G G T      L P++ +    S  S  +++  Y + + +G     + 
Sbjct: 200 GRLLIVFAMTALGYGGTFVAFTFLAPILQEVTGFSERSVSLILVLYGVAIAIG----NIA 255

Query: 69  FSRFGKRAALMALMAIFTLGNLL------SSLSPDYYTLLASRLVTSLNHGAFFGLGAVV 122
             R      + AL+ +F L  L+      +++SP   TL+    +  L+     GL   V
Sbjct: 256 GGRIANTNPVKALIGLFLLQALVLVIFSFTAVSP-VLTLVTLAALGFLSFANVPGLQLYV 314

Query: 123 AASVVPKEKQASAVATMFMGLTIANIGGVPAATWIGQQI 161
               +     A  VA+  + +   N+ G+    W+G  +
Sbjct: 315 VQLAMEHRPGAVDVASA-LNIAAFNL-GIALGAWLGGMV 351